Study Phenotyping Study: Murlo

Identification

Name
Murlo
Identifier
dXJuOklOUkFFLVVSR0kvc3R1ZHkvSVRfUFBfMTg=
Source
Project name
GenTree
Seasons
2016-2017
Location name

Genotype

Accession number Name Taxon
IT_PP_18_01 IT_PP_18_01 Pinus pinaster
IT_PP_18_02 IT_PP_18_02 Pinus pinaster
IT_PP_18_03 IT_PP_18_03 Pinus pinaster
IT_PP_18_04 IT_PP_18_04 Pinus pinaster
IT_PP_18_05 IT_PP_18_05 Pinus pinaster
IT_PP_18_06 IT_PP_18_06 Pinus pinaster
IT_PP_18_07 IT_PP_18_07 Pinus pinaster
IT_PP_18_08 IT_PP_18_08 Pinus pinaster
IT_PP_18_09 IT_PP_18_09 Pinus pinaster
IT_PP_18_10 IT_PP_18_10 Pinus pinaster
IT_PP_18_11 IT_PP_18_11 Pinus pinaster
IT_PP_18_12 IT_PP_18_12 Pinus pinaster
IT_PP_18_13 IT_PP_18_13 Pinus pinaster
IT_PP_18_14 IT_PP_18_14 Pinus pinaster
IT_PP_18_15 IT_PP_18_15 Pinus pinaster
IT_PP_18_16 IT_PP_18_16 Pinus pinaster
IT_PP_18_17 IT_PP_18_17 Pinus pinaster
IT_PP_18_18 IT_PP_18_18 Pinus pinaster
IT_PP_18_19 IT_PP_18_19 Pinus pinaster
IT_PP_18_20 IT_PP_18_20 Pinus pinaster
IT_PP_18_21 IT_PP_18_21 Pinus pinaster
IT_PP_18_22 IT_PP_18_22 Pinus pinaster
IT_PP_18_23 IT_PP_18_23 Pinus pinaster
IT_PP_18_24 IT_PP_18_24 Pinus pinaster
IT_PP_18_25 IT_PP_18_25 Pinus pinaster

Variables

Variable ID Variable short name Variable long name Ontology name Trait description
CO_357:0000003 ANG_n5 Branch angle - rating on 5 Woody Plant Ontology Assessment of the branches angle
CO_357:0000007 BarkT Bark thickness Woody Plant Ontology Asessment of the thickness of the part of the stem that is external to the wood or xylem, including the vascular cambium: the bark
CO_357:0000021 COM Comments Woody Plant Ontology Observations on the tree, unsystematic and somewhat anecdotal
CO_357:0000022 DBH Tree diameter Woody Plant Ontology Diameter of the tree main stem
CO_357:0000035 FLX_n5 Flexuosity - rating on 5 Woody Plant Ontology Assessment of the flexuosity of the tree
CO_357:0000038 FO_index Forking index Woody Plant Ontology Combination of the forking position and the number of forks, the highest index being for non-forking trees and for trees with a lower number of forks at a higher position
CO_357:0000060 NBF Fruits/Cones number Woody Plant Ontology Assessment of the fructification
CO_357:0000078 SEX Sex determination Woody Plant Ontology Determination of the tree sex
CO_357:0000080 SLA Specific leaf area Woody Plant Ontology Leaf area per unit of leaf dry mass
CO_357:0000081 STAT Status Woody Plant Ontology Assessment of the tree status
CO_357:0000085 Delta13C Leaf carbone isotope discrimination Woody Plant Ontology Carbon isotope (C13) composition in leaves
CO_357:0000095 BarkT_mean Bark thickness mean Woody Plant Ontology Asessment of the thickness of the part of the stem that is external to the wood or xylem, including the vascular cambium: the bark
CO_357:0000096 NBF_mean Fruits/Cones number mean Woody Plant Ontology Assessment of the fructification
CO_357:0000097 RECD Harvest date Woody Plant Ontology Identification of the tree on which samples were collected
CO_357:0000098 DIST Distance individual/neighbor Woody Plant Ontology Distance between the sampled tree and its closest neighbors
CO_357:0000099 NCI Competition index Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000100 canopy_projection Canopy projection Woody Plant Ontology Length of the maximum extension of canopy branches from one end to the other (crown diameter)
CO_357:0000101 crown_size Crown size Woody Plant Ontology Footprint or plan area of the crown of a tree expressed as crown width
CO_357:0000102 soil_depth Soil depth Woody Plant Ontology Soil depth around the tree
CO_357:0000103 stone_content Soil stone content Woody Plant Ontology Stone content in the soil around the tree
CO_357:0000104 slope Individual slope Woody Plant Ontology Slope angle at the location of the tree
CO_357:0000105 aspect Individual aspect Woody Plant Ontology The direction (azimuth) that the slope faces at the location of the tree
CO_357:0000106 elevation Elevation Woody Plant Ontology Elevation above sea level of the tree level
CO_357:0000107 cover1 Independant Vegetation/Rock cover Woody Plant Ontology Assessment of the amount of vegetation or rock cover on the ground around the tree
CO_357:0000109 regeneration Natural regeneration Woody Plant Ontology Abundance of natural regeneration around the tree
CO_357:0000110 photo Photo Woody Plant Ontology Name of the file or archive where photo(s) of the tree can be found
CO_357:0000111 HTm Tree total height in m Woody Plant Ontology Total height of the tree, from the ground to the tallest part of the crown
CO_357:0000257 LA Leaf area Woody Plant Ontology Total area of the leaf
CO_357:0000510 %C Leaf carbon content Woody Plant Ontology Carbon content in leaves
CO_357:0000511 %N Leaf nitrogen content Woody Plant Ontology Nitrogen content in leaves
CO_357:0000512 C/N Leaf carbon-to-nitrogen ratio Woody Plant Ontology Ratio of the mass of carbon to the mass of nitrogen in leaves. It can, amongst other things, be used in analysing sediments and compost.
CO_357:0000513 Delta15N Leaf nitrogen isotope discrimination Woody Plant Ontology Nitrogen isotope (N15) composition in leaves
CO_357:0000552 comp.index.a Competition index a Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000553 comp.index.b Competition index b Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000554 comp.index.c Competition index c Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000555 comp.index.d Competition index d Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000556 basal_area basal area Woody Plant Ontology
CO_357:0000557 crown_ellipse crown ellipse Woody Plant Ontology Footprint or plan area of the crown of a tree expressed as crown width
CO_357:0000558 crown_round crown round Woody Plant Ontology Footprint or plan area of the crown of a tree expressed as crown width
CO_357:0000559 multistem multistem tree Woody Plant Ontology Multistem tree
CO_357:0000560 neighbor conspecific neighbor Woody Plant Ontology Conspecific neighbor
CO_357:0000561 aspect2 Individual aspect Woody Plant Ontology The direction (azimuth) that the slope faces at the location of the tree

Contact

Role Name Email Institution
DataProvider Giovanni Giuseppe VENDRAMIN giovanni.vendramin_ibbr.cnr.it Istituto di Bioscienze e Biorisorse - National Research Council of Italy
DataProvider Ilaria SPANU ilaria.spanu_ibbr.cnr.it Istituto di Bioscienze e Biorisorse - National Research Council of Italy
DataProvider Mariaceleste LABRIOLA mclabriola_gmail.com Istituto di Bioscienze e Biorisorse - National Research Council of Italy
DataProvider Andrea PIOTTI andrea.piotti_gmail.com Istituto di Bioscienze e Biorisorse - National Research Council of Italy
DataProvider Francesca BAGNOLI francesca.bagnoli_ibbr.cnr.it Istituto di Bioscienze e Biorisorse - National Research Council of Italy