Study Phenotyping Study: Trimmis / Rodauen

Identification

Name
Trimmis / Rodauen
Identifier
dXJuOklOUkFFLVVSR0kvc3R1ZHkvQ0hfUE9fMTI=
Source
URGI GnpIS logo
Data link
Link to this study on URGI GnpIS
Project name
GenTree
Active
No
Seasons
2016-2017
Location name
Trimmis / Rodauen (CH_PO_12)
Data files

Genotype

Accession number Name Taxon
CH_PO_12_01 CH_PO_12_01 Populus nigra
CH_PO_12_02 CH_PO_12_02 Populus nigra
CH_PO_12_03 CH_PO_12_03 Populus nigra
CH_PO_12_04 CH_PO_12_04 Populus nigra
CH_PO_12_05 CH_PO_12_05 Populus nigra
CH_PO_12_06 CH_PO_12_06 Populus nigra
CH_PO_12_07 CH_PO_12_07 Populus nigra
CH_PO_12_08 CH_PO_12_08 Populus nigra
CH_PO_12_09 CH_PO_12_09 Populus nigra
CH_PO_12_10 CH_PO_12_10 Populus nigra
CH_PO_12_11 CH_PO_12_11 Populus nigra
CH_PO_12_12 CH_PO_12_12 Populus nigra
CH_PO_12_13 CH_PO_12_13 Populus nigra
CH_PO_12_14 CH_PO_12_14 Populus nigra
CH_PO_12_15 CH_PO_12_15 Populus nigra
CH_PO_12_16 CH_PO_12_16 Populus nigra
CH_PO_12_17 CH_PO_12_17 Populus nigra
CH_PO_12_18 CH_PO_12_18 Populus nigra
CH_PO_12_19 CH_PO_12_19 Populus nigra
CH_PO_12_20 CH_PO_12_20 Populus nigra
CH_PO_12_21 CH_PO_12_21 Populus nigra
CH_PO_12_22 CH_PO_12_22 Populus nigra
CH_PO_12_23 CH_PO_12_23 Populus nigra
CH_PO_12_24 CH_PO_12_24 Populus nigra
CH_PO_12_25 CH_PO_12_25 Populus nigra
CH_PO_12_26 CH_PO_12_26 Populus nigra
CH_PO_12_27 CH_PO_12_27 Populus nigra
CH_PO_12_28 CH_PO_12_28 Populus nigra
CH_PO_12_29 CH_PO_12_29 Populus nigra
CH_PO_12_30 CH_PO_12_30 Populus nigra
CH_PO_12_31 CH_PO_12_31 Populus nigra
CH_PO_12_32 CH_PO_12_32 Populus nigra

Variables

Variable ID Variable short name Variable long name Ontology name Trait description
CO_357:0000003 Branch angle - rating on 5 ANG_n5 Woody Plant Ontology Assessment of the branches angle
CO_357:0000007 Bark thickness BarkT Woody Plant Ontology Asessment of the thickness of the part of the stem that is external to the wood or xylem, including the vascular cambium: the bark
CO_357:0000021 Comments COM Woody Plant Ontology Observations on the tree, unsystematic and somewhat anecdotal
CO_357:0000022 Tree diameter DBH Woody Plant Ontology Diameter of the tree main stem
CO_357:0000035 Flexuosity - rating on 5 FLX_n5 Woody Plant Ontology Assessment of the flexuosity of the tree
CO_357:0000038 Forking index FO_index Woody Plant Ontology Combination of the forking position and the number of forks, the highest index being for non-forking trees and for trees with a lower number of forks at a higher position
CO_357:0000060 Fruits/Cones number NBF Woody Plant Ontology Assessment of the fructification
CO_357:0000078 Sex determination SEX Woody Plant Ontology Determination of the tree sex
CO_357:0000080 Specific leaf area SLA Woody Plant Ontology Leaf area per unit of leaf dry mass
CO_357:0000081 Status STAT Woody Plant Ontology Assessment of the tree status
CO_357:0000085 Leaf carbone isotope discrimination Delta13C Woody Plant Ontology Carbon isotope (C13) composition in leaves
CO_357:0000095 Bark thickness mean BarkT_mean Woody Plant Ontology Asessment of the thickness of the part of the stem that is external to the wood or xylem, including the vascular cambium: the bark
CO_357:0000096 Fruits/Cones number mean NBF_mean Woody Plant Ontology Assessment of the fructification
CO_357:0000097 Harvest date RECD Woody Plant Ontology Identification of the tree on which samples were collected
CO_357:0000098 Distance individual/neighbor DIST Woody Plant Ontology Distance between the sampled tree and its closest neighbors
CO_357:0000099 Competition index NCI Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000100 Canopy projection canopy_projection Woody Plant Ontology Length of the maximum extension of canopy branches from one end to the other (crown diameter)
CO_357:0000101 Crown size crown_size Woody Plant Ontology Footprint or plan area of the crown of a tree expressed as crown width
CO_357:0000102 Soil depth soil_depth Woody Plant Ontology Soil depth around the tree
CO_357:0000103 Soil stone content stone_content Woody Plant Ontology Stone content in the soil around the tree
CO_357:0000104 Individual slope slope Woody Plant Ontology Slope angle at the location of the tree
CO_357:0000105 Individual aspect - Gradient aspect Woody Plant Ontology The direction (azimuth) that the slope faces at the location of the tree
CO_357:0000106 Elevation elevation Woody Plant Ontology Elevation above sea level of the tree level
CO_357:0000107 Independant Vegetation/Rock cover cover1 Woody Plant Ontology Assessment of the amount of vegetation or rock cover on the ground around the tree
CO_357:0000109 Natural regeneration regeneration Woody Plant Ontology Abundance of natural regeneration around the tree
CO_357:0000111 Tree total height in m HTm Woody Plant Ontology Total height of the tree, from the ground to the tallest part of the crown
CO_357:0000257 Leaf area LA Woody Plant Ontology Total area of the leaf
CO_357:0000510 Percentage leaf carbon content %C Woody Plant Ontology Carbon content in leaves
CO_357:0000511 Percentage leaf nitrogen content %N Woody Plant Ontology Nitrogen content in leaves
CO_357:0000512 Leaf carbon-to-nitrogen ratio C/N Woody Plant Ontology Ratio of the mass of carbon to the mass of nitrogen in leaves. It can, amongst other things, be used in analysing sediments and compost.
CO_357:0000513 Leaf nitrogen isotope discrimination Delta15N Woody Plant Ontology Nitrogen isotope (N15) composition in leaves
CO_357:0000552 Competition index a comp.index.a Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000553 Competition index b comp.index.b Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000554 Competition index c comp.index.c Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000555 Competition index d comp.index.d Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000556 basal area basal_area Woody Plant Ontology Basal area
CO_357:0000557 crown ellipse crown_ellipse Woody Plant Ontology Footprint or plan area of the crown of a tree expressed as crown width
CO_357:0000558 crown round crown_round Woody Plant Ontology Footprint or plan area of the crown of a tree expressed as crown width
CO_357:0000559 multistem tree multistem Woody Plant Ontology Multistem tree
CO_357:0000560 conspecific neighbor neighbor Woody Plant Ontology Conspecific neighbor
CO_357:0000561 Individual aspect - Orientation aspect2 Woody Plant Ontology The direction (azimuth) that the slope faces at the location of the tree

Data Set

Name Type Linked studies identifier
GenTree Network Paterzell Kazitiskis Porquerolles Kühkopf Benasque Eslida (wet pair) Prati di Tivo Rossiglione Collobrières (Maures, bas) Aridaia1/ Central Macedonia Kassandreia/Chalkidiki Ordimnos/Lesvos Frillensee 2 Frillensee 1 Peitz Fünfeichen Ranta-Halola, Savonlinna Koiravaara, Rovaniemi Ranta-Halola, Savonlinna Punteniellu Vareilles Isola (haut) Mont Ventoux (N4) Saint-Guilhem-le-désert Sainte-Baume Reiter Alpe Waldsieversdorf Sieväkari, Rovaniemi Koivikkoniemi, Rovaniemi Mont Ventoux (Vtx263) Isola (bas) Mont Ventoux (N1) Coscione (bas) Restonica Fiumorbu Ceppo Sierra Cebollera Navafría Collobrières (Maures, haut) Aridaia2/ Central Macedonia Olympos/ Lesvos Salzach Godendorf Ranta-Halola, Savonlinna Coscione (haut) Grono / Gallina Sierre / Ochsenboden Lommiswil / Vorberg Bettlach / Wagnerbann Grono / Gallina Fully / Les Planches Große Deffernik, Bavarian Forest National Park Filzwald, Bavarian Forest National Park Pollino La Zelata Loibltal, Ferlach Hirschwang, Neunkirchen Hirschwang, Neunkirchen Roudsea Howe Wood Beinn Eighe Woodhall Dean Roudsea Vouillé Moulière Tsakalos/ Southern Rodopi Østmarka Smoldalen Østmarka Biescas Valle del Ara Valle del Ara Moncayo Moncayo Bujaruelo Zuera Zuera Alzira Montán Cabrera Gredos (Navalacruz) Cuéllar Huéscar Huéscar Rott Joachimsthal Méolans-Revel (bas) Iragna / Citto Grono / Alp d'Albion Maggia / Someo Martigny / Le Bourg Hagenstein, Kellerwald Croda da Lago Ombrone Viktring, Klagenfurt Hirschwang, Neunkirchen Hirschwang, Neunkirchen Abernethy Abernethy Brånakollene Arnaia1/ Chalkidiki Elatia/ Southern Rodopi Smoldalen Bujaruelo Carratraca Alberche La Alfranca Navafría Bavella (Corse, haut) Aspra spitia/ Peloponnese Chelona/ Chalkidiki Gallkos river/ Central Macedonia Marcinkonys Bargailiai Veisejai-Seirijai Nidzica Dechow Méolans-Revel (haut) Isone / Cima di Fuori Zuoz / God Giavagl Berg am Irchel / Hochwacht Traddelkopf, Kellerwald Croda da Lago Merse Urwald Kahlkogel, Villach Kalwang, Leoben Rumerhedge Roudsea Våle Arnaia2/ Chalkidiki Fteri/ Central Macedonia Skiftenes Cómpeta Cómpeta Arenas de San Pedro Arenas de San Pedro SPM Ramière Chabrioux Arlanc Husbondliden Brattby Osbecks_Bokskogar Jämntlandskälen Bäcksjön Fogdaröd Kolleberga_Ekbacken Fonte allo Squarto Sirente Pietracamela Prati di Tivo Tatti Monterufoli Val di Rhemes Croda da Lago Otricoli Gargano Sospirolo Aspromonte Magra/Montemarcello Montignoso/Apuane Parma Sakiai Boréon Glarus Nord / Rautialp Berg am Irchel / Irchelebni Wastlhütte, Bavarian Forest National Park Bosco Siro Negri Østmarka Viktring, Klagenfurt Zirknitz, Großkirchheim Ritini/ Central Macedonia Nedre Timenes Cuéllar Sainte Luce sur Loire Die Sjörup Umgransele_Slåttertjärn Särö Västerskog Aspromonte Tocchi Parma Bavella (Corse, bas) Louvro/ Peloponnese Taygetos-Pirofilakio/ Peloponnese Moni Ag. Dionisiou/Mt Olympus Prienai-Verkne Bois des Ayes Buerchen / Buerchneralp Wald / Scheidegg Falkenstein, Bavarian Forest National Park Nes Brandvik Cuéllar Goudet Murlo Lacanau (Landes, sec) Mont Iremal Prokopi/Euboea Artemisia/ Peloponnese Musteika Font-Blanche Zonser Grind Valle del Ara Eslida (dry pair) Aspromonte Arenzano Lège (Landes, humide) Valley of the Yuruzan river;

Contact

Role Name Email Institution
DataProvider Christian RELLSTAB christian.rellstab_wsl.ch Swiss Federal Institute for Forest, Snow and Landscape Research
DataProvider Patrick FONTI patrick.fonti_sl.ch Swiss Federal Institute for Forest, Snow and Landscape Research
DataProvider Felix GUGERLI felix.gugerli_wsl.ch Swiss Federal Institute for Forest, Snow and Landscape Research