Study Phenotyping Study: Zirknitz, Großkirchheim

Identification

Name
Zirknitz, Großkirchheim
Identifier
dXJuOklOUkFFLVVSR0kvc3R1ZHkvQVRfUENfMTQ=
Source
Project name
GenTree
Seasons
2016-2017

Genotype

Accession number Name Taxon
AT_PC_14_01a AT_PC_14_01a Pinus cembra
AT_PC_14_01j AT_PC_14_01j Pinus cembra
AT_PC_14_02a AT_PC_14_02a Pinus cembra
AT_PC_14_02j AT_PC_14_02j Pinus cembra
AT_PC_14_03a AT_PC_14_03a Pinus cembra
AT_PC_14_04a AT_PC_14_04a Pinus cembra
AT_PC_14_04j AT_PC_14_04j Pinus cembra
AT_PC_14_05a AT_PC_14_05a Pinus cembra
AT_PC_14_05j AT_PC_14_05j Pinus cembra
AT_PC_14_06a AT_PC_14_06a Pinus cembra
AT_PC_14_06j AT_PC_14_06j Pinus cembra
AT_PC_14_07a AT_PC_14_07a Pinus cembra
AT_PC_14_07j AT_PC_14_07j Pinus cembra
AT_PC_14_08a AT_PC_14_08a Pinus cembra
AT_PC_14_08j AT_PC_14_08j Pinus cembra
AT_PC_14_09a AT_PC_14_09a Pinus cembra
AT_PC_14_09j AT_PC_14_09j Pinus cembra
AT_PC_14_10a AT_PC_14_10a Pinus cembra
AT_PC_14_10j AT_PC_14_10j Pinus cembra
AT_PC_14_11a AT_PC_14_11a Pinus cembra
AT_PC_14_11j AT_PC_14_11j Pinus cembra
AT_PC_14_12a AT_PC_14_12a Pinus cembra
AT_PC_14_12j AT_PC_14_12j Pinus cembra
AT_PC_14_13a AT_PC_14_13a Pinus cembra
AT_PC_14_13j AT_PC_14_13j Pinus cembra
AT_PC_14_14a AT_PC_14_14a Pinus cembra
AT_PC_14_14j AT_PC_14_14j Pinus cembra
AT_PC_14_15a AT_PC_14_15a Pinus cembra
AT_PC_14_15j AT_PC_14_15j Pinus cembra
AT_PC_14_16a AT_PC_14_16a Pinus cembra
AT_PC_14_16j AT_PC_14_16j Pinus cembra
AT_PC_14_17a AT_PC_14_17a Pinus cembra
AT_PC_14_17j AT_PC_14_17j Pinus cembra
AT_PC_14_18a AT_PC_14_18a Pinus cembra
AT_PC_14_18j AT_PC_14_18j Pinus cembra
AT_PC_14_19a AT_PC_14_19a Pinus cembra
AT_PC_14_19j AT_PC_14_19j Pinus cembra
AT_PC_14_20a AT_PC_14_20a Pinus cembra
AT_PC_14_20j AT_PC_14_20j Pinus cembra
AT_PC_14_21a AT_PC_14_21a Pinus cembra
AT_PC_14_21j AT_PC_14_21j Pinus cembra
AT_PC_14_22a AT_PC_14_22a Pinus cembra
AT_PC_14_22j AT_PC_14_22j Pinus cembra
AT_PC_14_23a AT_PC_14_23a Pinus cembra
AT_PC_14_23j AT_PC_14_23j Pinus cembra
AT_PC_14_24a AT_PC_14_24a Pinus cembra
AT_PC_14_24j AT_PC_14_24j Pinus cembra
AT_PC_14_25a AT_PC_14_25a Pinus cembra
AT_PC_14_25j AT_PC_14_25j Pinus cembra

Variables

Variable ID Variable short name Variable long name Ontology name Trait description
CO_357:0000003 ANG_n5 Branch angle - rating on 5 Woody Plant Ontology Assessment of the branches angle
CO_357:0000007 BarkT Bark thickness Woody Plant Ontology Asessment of the thickness of the part of the stem that is external to the wood or xylem, including the vascular cambium: the bark
CO_357:0000021 COM Comments Woody Plant Ontology Observations on the tree, unsystematic and somewhat anecdotal
CO_357:0000022 DBH Tree diameter Woody Plant Ontology Diameter of the tree main stem
CO_357:0000035 FLX_n5 Flexuosity - rating on 5 Woody Plant Ontology Assessment of the flexuosity of the tree
CO_357:0000038 FO_index Forking index Woody Plant Ontology Combination of the forking position and the number of forks, the highest index being for non-forking trees and for trees with a lower number of forks at a higher position
CO_357:0000060 NBF Fruits/Cones number Woody Plant Ontology Assessment of the fructification
CO_357:0000078 SEX Sex determination Woody Plant Ontology Determination of the tree sex
CO_357:0000081 STAT Status Woody Plant Ontology Assessment of the tree status
CO_357:0000095 BarkT_mean Bark thickness mean Woody Plant Ontology Asessment of the thickness of the part of the stem that is external to the wood or xylem, including the vascular cambium: the bark
CO_357:0000096 NBF_mean Fruits/Cones number mean Woody Plant Ontology Assessment of the fructification
CO_357:0000097 RECD Harvest date Woody Plant Ontology Identification of the tree on which samples were collected
CO_357:0000098 DIST Distance individual/neighbor Woody Plant Ontology Distance between the sampled tree and its closest neighbors
CO_357:0000099 NCI Competition index Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000100 canopy_projection Canopy projection Woody Plant Ontology Length of the maximum extension of canopy branches from one end to the other (crown diameter)
CO_357:0000101 crown_size Crown size Woody Plant Ontology Footprint or plan area of the crown of a tree expressed as crown width
CO_357:0000102 soil_depth Soil depth Woody Plant Ontology Soil depth around the tree
CO_357:0000103 stone_content Soil stone content Woody Plant Ontology Stone content in the soil around the tree
CO_357:0000104 slope Individual slope Woody Plant Ontology Slope angle at the location of the tree
CO_357:0000105 aspect Individual aspect Woody Plant Ontology The direction (azimuth) that the slope faces at the location of the tree
CO_357:0000107 cover1 Independant Vegetation/Rock cover Woody Plant Ontology Assessment of the amount of vegetation or rock cover on the ground around the tree
CO_357:0000109 regeneration Natural regeneration Woody Plant Ontology Abundance of natural regeneration around the tree
CO_357:0000110 photo Photo Woody Plant Ontology Name of the file or archive where photo(s) of the tree can be found
CO_357:0000111 HTm Tree total height in m Woody Plant Ontology Total height of the tree, from the ground to the tallest part of the crown
CO_357:0000552 comp.index.a Competition index a Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000553 comp.index.b Competition index b Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000554 comp.index.c Competition index c Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000555 comp.index.d Competition index d Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000556 basal_area basal area Woody Plant Ontology
CO_357:0000557 crown_ellipse crown ellipse Woody Plant Ontology Footprint or plan area of the crown of a tree expressed as crown width
CO_357:0000558 crown_round crown round Woody Plant Ontology Footprint or plan area of the crown of a tree expressed as crown width
CO_357:0000559 multistem multistem tree Woody Plant Ontology Multistem tree
CO_357:0000560 neighbor conspecific neighbor Woody Plant Ontology Conspecific neighbor
CO_357:0000561 aspect2 Individual aspect Woody Plant Ontology The direction (azimuth) that the slope faces at the location of the tree

Data Set

Name Type Linked studies identifier
GenTree Network Paterzell Kazitiskis Porquerolles Kühkopf Benasque Eslida (wet pair) Prati di Tivo Rossiglione Collobrières (Maures, bas) Aridaia1/ Central Macedonia Kassandreia/Chalkidiki Ordimnos/Lesvos Frillensee 2 Frillensee 1 Peitz Fünfeichen Ranta-Halola, Savonlinna Koiravaara, Rovaniemi Ranta-Halola, Savonlinna Punteniellu Vareilles Isola (haut) Mont Ventoux (N4) Saint-Guilhem-le-désert Sainte-Baume Reiter Alpe Waldsieversdorf Sieväkari, Rovaniemi Koivikkoniemi, Rovaniemi Mont Ventoux (Vtx263) Isola (bas) Mont Ventoux (N1) Coscione (bas) Restonica Fiumorbu Ceppo Sierra Cebollera Navafría Collobrières (Maures, haut) Aridaia2/ Central Macedonia Olympos/ Lesvos Salzach Godendorf Ranta-Halola, Savonlinna Coscione (haut) Grono / Gallina Sierre / Ochsenboden Lommiswil / Vorberg Bettlach / Wagnerbann Grono / Gallina Trimmis / Rodauen Fully / Les Planches Große Deffernik, Bavarian Forest National Park Filzwald, Bavarian Forest National Park Pollino La Zelata Loibltal, Ferlach Hirschwang, Neunkirchen Hirschwang, Neunkirchen Roudsea Howe Wood Beinn Eighe Woodhall Dean Roudsea Vouillé Moulière Tsakalos/ Southern Rodopi Østmarka Smoldalen Østmarka Biescas Valle del Ara Valle del Ara Moncayo Moncayo Bujaruelo Zuera Zuera Alzira Montán Cabrera Gredos (Navalacruz) Cuéllar Huéscar Huéscar Rott Joachimsthal Méolans-Revel (bas) Iragna / Citto Grono / Alp d'Albion Maggia / Someo Martigny / Le Bourg Hagenstein, Kellerwald Croda da Lago Ombrone Viktring, Klagenfurt Hirschwang, Neunkirchen Hirschwang, Neunkirchen Abernethy Abernethy Brånakollene Arnaia1/ Chalkidiki Elatia/ Southern Rodopi Smoldalen Bujaruelo Carratraca Alberche La Alfranca Navafría Bavella (Corse, haut) Aspra spitia/ Peloponnese Chelona/ Chalkidiki Gallkos river/ Central Macedonia Marcinkonys Bargailiai Veisejai-Seirijai Nidzica Dechow Méolans-Revel (haut) Isone / Cima di Fuori Zuoz / God Giavagl Berg am Irchel / Hochwacht Traddelkopf, Kellerwald Croda da Lago Merse Urwald Kahlkogel, Villach Kalwang, Leoben Rumerhedge Roudsea Våle Arnaia2/ Chalkidiki Fteri/ Central Macedonia Skiftenes Cómpeta Cómpeta Arenas de San Pedro Arenas de San Pedro SPM Ramière Chabrioux Arlanc Husbondliden Brattby Osbecks_Bokskogar Jämntlandskälen Bäcksjön Fogdaröd Kolleberga_Ekbacken Fonte allo Squarto Sirente Pietracamela Prati di Tivo Tatti Monterufoli Val di Rhemes Croda da Lago Otricoli Gargano Sospirolo Aspromonte Magra/Montemarcello Montignoso/Apuane Parma Sakiai Boréon Glarus Nord / Rautialp Berg am Irchel / Irchelebni Wastlhütte, Bavarian Forest National Park Bosco Siro Negri Østmarka Viktring, Klagenfurt Ritini/ Central Macedonia Nedre Timenes Cuéllar Sainte Luce sur Loire Die Sjörup Umgransele_Slåttertjärn Särö Västerskog Aspromonte Tocchi Parma Bavella (Corse, bas) Louvro/ Peloponnese Taygetos-Pirofilakio/ Peloponnese Moni Ag. Dionisiou/Mt Olympus Prienai-Verkne Bois des Ayes Buerchen / Buerchneralp Wald / Scheidegg Falkenstein, Bavarian Forest National Park Nes Brandvik Cuéllar Goudet Murlo Lacanau (Landes, sec) Mont Iremal Prokopi/Euboea Artemisia/ Peloponnese Musteika Font-Blanche Zonser Grind Valle del Ara Eslida (dry pair) Aspromonte Arenzano Lège (Landes, humide) Valley of the Yuruzan river;