Study Phenotyping Study: Porquerolles

Identification

Name
Porquerolles
Identifier
dXJuOklOUkFFLVVSR0kvc3R1ZHkvRlJfUEhfMTU=
Source
Project name
GenTree
Seasons
2016-2017
Location name

Genotype

Accession number Name Taxon
FR_PH_15_01 FR_PH_15_01 Pinus halepensis
FR_PH_15_02 FR_PH_15_02 Pinus halepensis
FR_PH_15_03 FR_PH_15_03 Pinus halepensis
FR_PH_15_04 FR_PH_15_04 Pinus halepensis
FR_PH_15_05 FR_PH_15_05 Pinus halepensis
FR_PH_15_06 FR_PH_15_06 Pinus halepensis
FR_PH_15_07 FR_PH_15_07 Pinus halepensis
FR_PH_15_08 FR_PH_15_08 Pinus halepensis
FR_PH_15_09 FR_PH_15_09 Pinus halepensis
FR_PH_15_10 FR_PH_15_10 Pinus halepensis
FR_PH_15_11 FR_PH_15_11 Pinus halepensis
FR_PH_15_12 FR_PH_15_12 Pinus halepensis
FR_PH_15_13 FR_PH_15_13 Pinus halepensis
FR_PH_15_14 FR_PH_15_14 Pinus halepensis
FR_PH_15_15 FR_PH_15_15 Pinus halepensis
FR_PH_15_16 FR_PH_15_16 Pinus halepensis
FR_PH_15_17 FR_PH_15_17 Pinus halepensis
FR_PH_15_18 FR_PH_15_18 Pinus halepensis
FR_PH_15_19 FR_PH_15_19 Pinus halepensis
FR_PH_15_20 FR_PH_15_20 Pinus halepensis
FR_PH_15_21 FR_PH_15_21 Pinus halepensis
FR_PH_15_22 FR_PH_15_22 Pinus halepensis
FR_PH_15_23 FR_PH_15_23 Pinus halepensis
FR_PH_15_24 FR_PH_15_24 Pinus halepensis
FR_PH_15_25 FR_PH_15_25 Pinus halepensis

Variables

Variable ID Variable short name Variable long name Ontology name Trait description
CO_357:0000003 ANG_n5 Branch angle - rating on 5 Woody Plant Ontology Assessment of the branches angle
CO_357:0000007 BarkT Bark thickness Woody Plant Ontology Asessment of the thickness of the part of the stem that is external to the wood or xylem, including the vascular cambium: the bark
CO_357:0000021 COM Comments Woody Plant Ontology Observations on the tree, unsystematic and somewhat anecdotal
CO_357:0000022 DBH Tree diameter Woody Plant Ontology Diameter of the tree main stem
CO_357:0000035 FLX_n5 Flexuosity - rating on 5 Woody Plant Ontology Assessment of the flexuosity of the tree
CO_357:0000038 FO_index Forking index Woody Plant Ontology Combination of the forking position and the number of forks, the highest index being for non-forking trees and for trees with a lower number of forks at a higher position
CO_357:0000060 NBF Fruits/Cones number Woody Plant Ontology Assessment of the fructification
CO_357:0000078 SEX Sex determination Woody Plant Ontology Determination of the tree sex
CO_357:0000081 STAT Status Woody Plant Ontology Assessment of the tree status
CO_357:0000095 BarkT_mean Bark thickness mean Woody Plant Ontology Asessment of the thickness of the part of the stem that is external to the wood or xylem, including the vascular cambium: the bark
CO_357:0000096 NBF_mean Fruits/Cones number mean Woody Plant Ontology Assessment of the fructification
CO_357:0000097 RECD Harvest date Woody Plant Ontology Identification of the tree on which samples were collected
CO_357:0000098 DIST Distance individual/neighbor Woody Plant Ontology Distance between the sampled tree and its closest neighbors
CO_357:0000099 NCI Competition index Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000100 canopy_projection Canopy projection Woody Plant Ontology Length of the maximum extension of canopy branches from one end to the other (crown diameter)
CO_357:0000101 crown_size Crown size Woody Plant Ontology Footprint or plan area of the crown of a tree expressed as crown width
CO_357:0000102 soil_depth Soil depth Woody Plant Ontology Soil depth around the tree
CO_357:0000103 stone_content Soil stone content Woody Plant Ontology Stone content in the soil around the tree
CO_357:0000104 slope Individual slope Woody Plant Ontology Slope angle at the location of the tree
CO_357:0000105 aspect Individual aspect Woody Plant Ontology The direction (azimuth) that the slope faces at the location of the tree
CO_357:0000106 elevation Elevation Woody Plant Ontology Elevation above sea level of the tree level
CO_357:0000107 cover1 Independant Vegetation/Rock cover Woody Plant Ontology Assessment of the amount of vegetation or rock cover on the ground around the tree
CO_357:0000109 regeneration Natural regeneration Woody Plant Ontology Abundance of natural regeneration around the tree
CO_357:0000110 photo Photo Woody Plant Ontology Name of the file or archive where photo(s) of the tree can be found
CO_357:0000111 HTm Tree total height in m Woody Plant Ontology Total height of the tree, from the ground to the tallest part of the crown
CO_357:0000552 comp.index.a Competition index a Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000553 comp.index.b Competition index b Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000554 comp.index.c Competition index c Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000555 comp.index.d Competition index d Woody Plant Ontology Assessment of the competition situation at the tree level
CO_357:0000556 basal_area basal area Woody Plant Ontology
CO_357:0000557 crown_ellipse crown ellipse Woody Plant Ontology Footprint or plan area of the crown of a tree expressed as crown width
CO_357:0000558 crown_round crown round Woody Plant Ontology Footprint or plan area of the crown of a tree expressed as crown width
CO_357:0000559 multistem multistem tree Woody Plant Ontology Multistem tree
CO_357:0000560 neighbor conspecific neighbor Woody Plant Ontology Conspecific neighbor
CO_357:0000561 aspect2 Individual aspect Woody Plant Ontology The direction (azimuth) that the slope faces at the location of the tree

Contact

Role Name Email Institution
DataProvider Bruno FADY bruno.fady_inrae.fr URFM - Ecologie des Forêts Méditerranéennes