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Data

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Vitis vinifera

Genome resources

  • Download the grapevine genomes sequences (chromosome, scaffolds, contigs).

 

Assembly summary

12X assembly

  • Contigs : 14,665
  • Scaffolds : 2,059 (> 2kb)
  • Mapped scaffolds : 211 (coverage of the genome : 91.2%)

8X assembly

  • Contigs : 19,577
  • Scaffolds : 3,514
  • Mapped ultracontigs : 191 (coverage of the genome : 68.9%)

 

Annotations summary

12X annotation

  • Annotated genes : 26,346
  • Annotated transcripts : 26,346
  • Average number of coding exons per gene : 5.95
  • Median gene size (bp) : 3,572
  • Average CDS size (bp) : 1,137
  • Median exon size (bp) : 122

8X annotation

  • Annotated genes : 30,434
  • Annotated transcripts : 30,434
  • Average number of coding exons per gene : 4.9
  • Median gene size (bp) : 3,399
  • Average CDS size (bp) : 1,116
  • Median exon size (bp) : 130

 

 

 

Update: 05 Apr 2012
Creation date: 28 Apr 2010