GO Term : GO:0006355 regulation of transcription, DNA-templated GO

Namespace  biological_process Obsolete  false
description  Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.

0 Cross References

1 Ontology

Name
GO

48 Parents

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0016070 RNA metabolic process The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
GO:0009058 biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO:0006351 transcription, DNA-templated The cellular synthesis of RNA on a template of DNA.
GO:0044237 cellular metabolic process The chemical reactions and pathways by which individual cells transform chemical substances.
GO:0006139 nucleobase-containing compound metabolic process Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
GO:0071704 organic substance metabolic process The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon.
GO:0006807 nitrogen compound metabolic process The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium.
GO:0044249 cellular biosynthetic process The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.
GO:0010468 regulation of gene expression Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
GO:0009059 macromolecule biosynthetic process The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
GO:0006725 cellular aromatic compound metabolic process The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
GO:0044238 primary metabolic process The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.
GO:0051252 regulation of RNA metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving RNA.
GO:0009987 cellular process Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
GO:0008150 biological_process Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
GO:0044260 cellular macromolecule metabolic process The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.
GO:0090304 nucleic acid metabolic process Any cellular metabolic process involving nucleic acids.
GO:0043170 macromolecule metabolic process The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
GO:0046483 heterocycle metabolic process The chemical reactions and pathways involving heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings).
GO:0034641 cellular nitrogen compound metabolic process The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells.
GO:1901360 organic cyclic compound metabolic process The chemical reactions and pathways involving organic cyclic compound.
GO:0019219 regulation of nucleobase-containing compound metabolic process Any cellular process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.
GO:0031323 regulation of cellular metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances.
GO:0080090 regulation of primary metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism involving those compounds formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.
GO:0065007 biological regulation Any process that modulates a measurable attribute of any biological process, quality or function.
GO:0060255 regulation of macromolecule metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
GO:0050794 regulation of cellular process Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
GO:0050789 regulation of biological process Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.

620 Protein

Protein Identifier
Organism . Name
Score Score Type Protein Description Alias (in v1) Code Enzyme Gene Prediction Quality
Qrob_P0000650.2 Quercus robur 3.0 egn (M=6) K09285 - AP2-like factor, ANT lineage     validated
Qrob_P0002960.2 Quercus robur 100.0 egn (M=4) PTHR31221:SF8 - WRKY TRANSCRIPTION FACTOR 57-RELATED (PTHR31221:SF8)     validated
Qrob_P0004150.2 Quercus robur 99.3 egn (M=8) PTHR31241:SF2 - DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2A-RELATED (PTHR31241:SF2)     validated
Qrob_P0004640.2 Quercus robur 98.0 egn (M=7) PTHR10071//PTHR10071:SF161 - TRANSCRIPTION FACTOR GATA (GATA BINDING FACTOR) // SUBFAMILY NOT NAMED (PTHR10071:SF161)     validated
Qrob_P0004690.2 Quercus robur 100.0 egn (M=1) KOG0113//KOG0147//KOG0151//KOG0670//KOG0794//KOG0834//KOG0835//KOG2888//KOG4676 - U1 small nuclear ribonucleoprotein (RRM superfamily) [RNA processing and modification]. // Transcriptional coactivator CAPER (RRM superfamily) [Transcription]. // Predicted splicing regulator contains RRM SWAP and RPR domains [General function prediction only]. // U4/U6-associated splicing factor PRP4 [RNA processing and modification]. // CDK8 kinase-activating protein cyclin C [Transcription]. // CDK9 kinase-activating protein cyclin T [Cell cycle control cell division chromosome partitioning]. // Cyclin L [General function prediction only]. // Putative RNA binding protein [General function prediction only]. // Splicing factor arginine/serine-rich [RNA processing and modification].     validated
Qrob_P0007890.2 Quercus robur 98.1 egn (M=1) PTHR11078 - N UTILIZATION SUBSTANCE PROTEIN B-RELATED     validated
Qrob_P0010200.2 Quercus robur     (M=24) K14484 - auxin-responsive protein IAA Qrob_P0773130.1   manual_v1
Qrob_P0010280.2 Quercus robur 100.0 egn (M=24) K14484 - auxin-responsive protein IAA     validated
Qrob_P0011210.2 Quercus robur 0.0 egn (M=4) PTHR13068:SF6 - gb def: agcp9491 [anopheles gambiae str. pest]     validated
Qrob_P0011490.2 Quercus robur 100.0 egn (M=4) PTHR13068:SF6 - gb def: agcp9491 [anopheles gambiae str. pest]     validated
Qrob_P0011880.2 Quercus robur 99.0 egn (M=8) K14431 - transcription factor TGA     validated
Qrob_P0013360.2 Quercus robur 100.0 egn (M=1) KOG0483//KOG0484//KOG0485//KOG0487//KOG0488//KOG0493//KOG0494//KOG0842//KOG0843//KOG4577 - Transcription factor HEX contains HOX and HALZ domains [Transcription]. // Transcription factor PHOX2/ARIX contains HOX domain [Transcription]. // Transcription factor NKX-5.1/HMX1 contains HOX domain [Transcription]. // Transcription factor Abd-B contains HOX domain [Transcription]. // Transcription factor BarH and related HOX domain proteins [General function prediction only]. // Transcription factor Engrailed contains HOX domain [General function prediction only]. // Transcription factor CHX10 and related HOX domain proteins [General function prediction only]. // Transcription factor tinman/NKX2-3 contains HOX domain [Transcription]. // Transcription factor EMX1 and related HOX domain proteins [Transcription]. // Transcription factor LIM3 contains LIM and HOX domains [Transcription].     validated
Qrob_P0013440.2 Quercus robur 0.0 egn (M=13) PTHR22847//PTHR22847:SF324 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED     validated
Qrob_P0013730.2 Quercus robur 100.0 egn (M=11) PTHR10593:SF20 - INDETERMINATE-DOMAIN 12 PROTEIN (PTHR10593:SF20)     validated
Qrob_P0013800.2 Quercus robur 100.0 egn (M=1) K14516 - ethylene-responsive transcription factor 1     validated
Qrob_P0013970.2 Quercus robur     (M=108) PF00847 - AP2 domain Qrob_P0236220.1   manual_v1
Qrob_P0014400.2 Quercus robur 100.0 egn (M=8) PTHR31985:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF025-RELATED (PTHR31985:SF9)     validated
Qrob_P0014410.2 Quercus robur 0.0 egn (M=8) PTHR31985:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF025-RELATED (PTHR31985:SF9)     validated
Qrob_P0014420.2 Quercus robur 100.0 egn (M=8) PTHR31985:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF025-RELATED (PTHR31985:SF9)     validated
Qrob_P0014460.2 Quercus robur 85.0 egn (M=108) PF00847 - AP2 domain     validated
Qrob_P0016970.2 Quercus robur 93.3 egn (M=1) PTHR11125:SF8 - KOW DOMAIN-CONTAINING TRANSCRIPTION FACTOR 1 (PTHR11125:SF8)     validated
Qrob_P0017090.2 Quercus robur 100.0 egn (M=22) PTHR31989:SF5 - F11O4.3-RELATED (PTHR31989:SF5)     validated
Qrob_P0017120.2 Quercus robur 100.0 egn (M=22) PTHR31989:SF5 - F11O4.3-RELATED (PTHR31989:SF5)     validated
Qrob_P0017400.2 Quercus robur 100.0 egn (M=3) PTHR12321 - CPG BINDING PROTEIN     validated
Qrob_P0018960.2 Quercus robur 38.4 egn (M=34) K15032 - mTERF domain-containing protein, mitochondrial     validated
Qrob_P0018970.2 Quercus robur 0.0 egn (M=34) K15032 - mTERF domain-containing protein, mitochondrial     validated
Qrob_P0020400.2 Quercus robur 0.0 egn (M=4) PTHR24326:SF122 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-12-RELATED (PTHR24326:SF122)     validated
Qrob_P0020660.2 Quercus robur 100.0 egn (M=1) PTHR13068:SF9 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN (PTHR13068:SF9)     validated
Qrob_P0020740.2 Quercus robur     (M=20) K09286 - EREBP-like factor Qrob_P0240870.1   manual_v1
Qrob_P0020780.2 Quercus robur 0.0 egn (M=34) PF03101 - FAR1 DNA-binding domain     validated

615 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0006355 GO:0000083
is_a GO:0006355 GO:0000117
is_a GO:0006355 GO:0000122
is_a GO:0006355 GO:0000183
is_a GO:0006355 GO:0000409
is_a GO:0006355 GO:0000410
is_a GO:0006355 GO:0000411
is_a GO:0006355 GO:0000429
is_a GO:0006355 GO:0000430
is_a GO:0006355 GO:0000431
is_a GO:0006355 GO:0000432
is_a GO:0006355 GO:0000433
is_a GO:0006355 GO:0000434
is_a GO:0006355 GO:0000435
is_a GO:0006355 GO:0000436
is_a GO:0006355 GO:0000437
is_a GO:0006355 GO:0001079
is_a GO:0006355 GO:0001080
is_a GO:0006355 GO:0001081
is_a GO:0006355 GO:0001177
is_a GO:0006355 GO:0001178
is_a GO:0006355 GO:0001196
is_a GO:0006355 GO:0001197
is_a GO:0006355 GO:0001198
regulates GO:0006355 GO:0001308
is_a GO:0006355 GO:0001308
negatively regulates GO:0006355 GO:0001308
is_a GO:0006355 GO:0003130
is_a GO:0006355 GO:0003154
is_a GO:0006355 GO:0003155

7 Synonyms

Name Type
GO:0045449 alt_id
GO:0061019 alt_id
regulation of transcription, DNA-dependent synonym
regulation of gene-specific transcription synonym
GO:0032583 alt_id
transcriptional control synonym
regulation of cellular transcription, DNA-dependent synonym