Protein : Qrob_P0017090.2 Q. robur
Protein Identifier  ? Qrob_P0017090.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=22) PTHR31989:SF5 - F11O4.3-RELATED (PTHR31989:SF5) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 273  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

31 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103489429 19 241 + 223 Gaps:11 48.11 449 77.31 3e-112 NAC domain-containing protein 77-like
blastp_kegg lcl|cam:101498838 1 190 + 190 Gaps:16 44.59 462 79.13 3e-111 NAC domain-containing protein 7-like
blastp_kegg lcl|csv:101210923 19 236 + 218 Gaps:10 46.67 450 77.62 6e-111 uncharacterized LOC101210923
blastp_kegg lcl|gmx:100808783 15 195 + 181 Gaps:1 39.14 465 84.07 2e-107 NAC transcription factor NAM-B2-like
blastp_kegg lcl|pmum:103331477 19 268 + 250 Gaps:13 40.78 640 63.60 4e-106 uncharacterized LOC103331477
blastp_kegg lcl|gmx:100782028 19 211 + 193 Gaps:2 41.51 465 80.31 2e-105 NAC domain-containing protein 7-like
blastp_kegg lcl|pop:POPTR_0010s23630g 14 210 + 197 Gaps:2 44.32 440 78.46 2e-105 POPTRDRAFT_725098 no apical meristem family protein
blastp_kegg lcl|mdm:103438860 19 253 + 235 Gaps:12 37.46 654 66.12 4e-105 uncharacterized LOC103438860
blastp_kegg lcl|pxb:103951718 19 268 + 250 Gaps:31 43.12 647 59.50 1e-102 uncharacterized LOC103951718
blastp_kegg lcl|pxb:103938368 19 243 + 225 Gaps:11 32.28 725 67.09 2e-102 filaggrin-2-like
blastp_pdb 3swp_D 15 171 + 157 Gaps:5 87.36 174 50.66 3e-50 mol:protein length:174 NAC domain-containing protein 19
blastp_pdb 3swp_C 15 171 + 157 Gaps:5 87.36 174 50.66 3e-50 mol:protein length:174 NAC domain-containing protein 19
blastp_pdb 3swp_B 15 171 + 157 Gaps:5 87.36 174 50.66 3e-50 mol:protein length:174 NAC domain-containing protein 19
blastp_pdb 3swp_A 15 171 + 157 Gaps:5 87.36 174 50.66 3e-50 mol:protein length:174 NAC domain-containing protein 19
blastp_pdb 3swm_D 15 171 + 157 Gaps:5 87.36 174 50.66 3e-50 mol:protein length:174 NAC domain-containing protein 19
blastp_pdb 3swm_C 15 171 + 157 Gaps:5 87.36 174 50.66 3e-50 mol:protein length:174 NAC domain-containing protein 19
blastp_pdb 3swm_B 15 171 + 157 Gaps:5 87.36 174 50.66 3e-50 mol:protein length:174 NAC domain-containing protein 19
blastp_pdb 3swm_A 15 171 + 157 Gaps:5 87.36 174 50.66 3e-50 mol:protein length:174 NAC domain-containing protein 19
blastp_pdb 4dul_B 15 171 + 157 Gaps:5 88.89 171 50.66 3e-50 mol:protein length:171 NAC domain-containing protein 19
blastp_pdb 4dul_A 15 171 + 157 Gaps:5 88.89 171 50.66 3e-50 mol:protein length:171 NAC domain-containing protein 19
blastp_uniprot_sprot sp|Q84K00|NAC78_ARATH 14 209 + 196 Gaps:4 34.22 567 63.92 2e-81 NAC domain-containing protein 78 OS Arabidopsis thaliana GN NAC078 PE 2 SV 2
blastp_uniprot_sprot sp|Q52QH4|NAC68_ORYSJ 16 171 + 156 Gaps:5 49.37 318 54.14 3e-53 NAC domain-containing protein 68 OS Oryza sativa subsp. japonica GN NAC68 PE 2 SV 1
blastp_uniprot_sprot sp|Q8H4S4|NAC10_ORYSJ 16 171 + 156 Gaps:22 40.94 425 48.85 4e-52 NAC transcription factor ONAC010 OS Oryza sativa subsp. japonica GN ONAC010 PE 2 SV 1
blastp_uniprot_sprot sp|A2YMR0|NAC10_ORYSI 16 171 + 156 Gaps:22 40.94 425 48.85 5e-52 NAC transcription factor ONAC010 OS Oryza sativa subsp. indica GN ONAC010 PE 3 SV 1
blastp_uniprot_sprot sp|A0SPJ4|NAMB1_TRIDC 16 209 + 194 Gaps:22 52.35 405 44.34 3e-51 NAC transcription factor NAM-B1 OS Triticum dicoccoides GN NAM-B1 PE 4 SV 1
blastp_uniprot_sprot sp|A0SPJ6|NAMB2_TRIDB 16 244 + 229 Gaps:26 59.34 396 41.70 3e-51 NAC transcription factor NAM-B2 OS Triticum durum GN NAM-B2 PE 2 SV 1
blastp_uniprot_sprot sp|A0SPJ9|NAM2_HORVD 16 171 + 156 Gaps:16 41.79 402 50.60 8e-51 NAC transcription factor NAM-2 OS Hordeum vulgare var. distichum GN NAM-2 PE 4 SV 1
blastp_uniprot_sprot sp|Q93VY3|NAC72_ARATH 15 171 + 157 Gaps:7 51.18 297 52.63 2e-50 NAC domain-containing protein 72 OS Arabidopsis thaliana GN NAC072 PE 2 SV 1
blastp_uniprot_sprot sp|A0SPJ3|NAMA1_TRIDB 16 171 + 156 Gaps:22 42.96 405 50.00 2e-50 NAC transcription factor NAM-A1 OS Triticum durum GN NAM-A1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GY42|NAC25_ARATH 16 179 + 164 Gaps:12 53.25 323 48.26 2e-50 NAC transcription factor 25 OS Arabidopsis thaliana GN NAC025 PE 2 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 13 170 158 SSF101941 none none IPR003441
PANTHER 14 191 178 PTHR31989 none none none
PANTHER 14 191 178 PTHR31989:SF5 none none none
ProSiteProfiles 16 169 154 PS51005 none NAC domain profile. IPR003441
Pfam 16 143 128 PF02365 none No apical meristem (NAM) protein IPR003441

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting