Protein : Qrob_P0013440.2 Q. robur
Protein Identifier  ? Qrob_P0013440.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=13) PTHR22847//PTHR22847:SF324 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 242  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.

18 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100800771 2 153 + 152 Gaps:31 16.19 1130 66.67 9e-69 topless-related protein 3-like
blastp_kegg lcl|cam:101489173 1 153 + 153 Gaps:31 15.99 1151 65.76 4e-68 topless-related protein 3-like
blastp_kegg lcl|pvu:PHAVU_007G198900g 1 153 + 153 Gaps:32 16.34 1132 65.41 1e-67 hypothetical protein
blastp_kegg lcl|pop:POPTR_0013s01360g 1 195 + 195 Gaps:38 20.73 1124 54.51 1e-67 POPTRDRAFT_773603 WD-40 repeat family protein
blastp_kegg lcl|gmx:100808421 1 153 + 153 Gaps:31 16.28 1130 64.67 3e-66 topless-related protein 3-like
blastp_kegg lcl|gmx:100793575 2 153 + 152 Gaps:31 16.19 1130 63.93 3e-66 topless-related protein 3-like
blastp_kegg lcl|tcc:TCM_026702 1 197 + 197 Gaps:42 20.41 1132 55.84 3e-66 TOPLESS-related 3 isoform 1
blastp_kegg lcl|sly:101262960 1 180 + 180 Gaps:38 19.27 1131 55.50 4e-66 topless-related protein 3-like
blastp_kegg lcl|cmo:103494476 1 180 + 180 Gaps:38 19.34 1127 56.42 6e-66 topless-related protein 3-like
blastp_kegg lcl|sot:102590171 1 180 + 180 Gaps:38 18.87 1155 55.50 6e-66 topless-related protein 3-like
blastp_uniprot_sprot sp|Q9LRZ0|TPR2_ARATH 1 153 + 153 Gaps:33 16.09 1131 59.89 5e-58 Topless-related protein 2 OS Arabidopsis thaliana GN TPR2 PE 1 SV 2
blastp_uniprot_sprot sp|Q84JM4|TPR3_ARATH 7 153 + 147 Gaps:31 16.06 1108 57.30 2e-57 Topless-related protein 3 OS Arabidopsis thaliana GN TPR3 PE 1 SV 1
blastp_uniprot_sprot sp|Q0WV90|TPR1_ARATH 3 195 + 193 Gaps:37 20.54 1120 37.83 6e-42 Topless-related protein 1 OS Arabidopsis thaliana GN TPR1 PE 1 SV 3
blastp_uniprot_sprot sp|Q94AI7|TPL_ARATH 3 180 + 178 Gaps:37 19.01 1131 39.53 2e-41 Protein TOPLESS OS Arabidopsis thaliana GN TPL PE 1 SV 1
blastp_uniprot_sprot sp|Q27GK7|TPR4_ARATH 3 195 + 193 Gaps:38 20.18 1135 36.24 2e-35 Topless-related protein 4 OS Arabidopsis thaliana GN TPR4 PE 1 SV 2
blastp_uniprot_sprot sp|Q8RWV3|CCL11_ARATH 174 234 + 61 Gaps:25 20.67 416 46.51 9e-16 Cyclin-L1-1 OS Arabidopsis thaliana GN CYCL1-1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9AS36|CCL11_ORYSJ 171 234 + 64 Gaps:25 20.84 427 41.57 4e-15 Cyclin-L1-1 OS Oryza sativa subsp. japonica GN CYCL1-1 PE 2 SV 1
rpsblast_kog gnl|CDD|36053 161 214 + 54 Gaps:2 14.17 367 44.23 2e-11 KOG0835 KOG0835 KOG0835 Cyclin L [General function prediction only].

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 109 147 39 PTHR22847 none none none
PANTHER 109 147 39 PTHR22847:SF324 none none IPR027728
Gene3D 172 206 35 G3DSA:1.10.472.10 none none IPR013763
SUPERFAMILY 170 201 32 SSF47954 none none IPR013763

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting