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PlantSyntenyViewer

PlantSyntenyViewer
  • Version: 1.01
  • Editor: URGI
  • Access: free acces url 

PlantSyntenyViewer


Synteny is gene's order conservation between differents species.

Developed by URGI team for J. Salse (INRA Clermont-Ferrand).

Publications:

Pont, Caroline; Murat, Florent; Guizard, Sebastien; Flores, Raphael; Foucrier, Severine; Bidet, Yannick; Quraishi, Umar Massod; Alaux, Michael; Dolezel, Jaroslav; Fahima, Tzion; Budak, Hikmet; Keller, Beat; Salvi, Silvio; Maccaferri, Marco; Steinbach, Delphine; Feuillet, Catherine; Quesneville, Hadi; Salse, Jerome

Plant J. 2013 Oct 26. doi: 10.1111/tpj.12366

Murat F, Zhang R, Guizard S, Flores R, Armero A, Pont C, Steinbach D, Quesneville H, Cooke R, Salse J.

Genome Biol Evol. 2013 Dec 6.

Florent Murat, Rongzhi R. Zhang, Sébastien Guizard, Haris Gavranovic, Raphael Flores, Delphine Steinbach, Hadi Quesneville, Eric Tannier, Jerôme Salse

Genome Biology and Evolution, Society for Molecular Biology and Evolution, 2015, 7 (3), pp.735-749.  ⟨10.1093/gbe/evv014⟩

Moaine El Baidouri, Florent Murat, Maeva Veyssière, Mélanie Molinier, Raphaël-Gauthier Flores, Laura Burlot, Michael Alaux, Hadi Quesneville, Caroline Pont, Jerôme Salse

New Phytologist, Wiley, 2016, 213 (3),  ⟨10.1111/nph.14113⟩

Umar Quraishi, Caroline Pont, Qurat-Ul Ain, Raphaël Flores, Laura Burlot,Michael Alaux, Hadi Quesneville, Jerôme Salse

Frontiers in Plant Science, Frontiers, 2017, 8, pp.1-12.  ⟨10.3389/fpls.2017.01843⟩

 

You can access a video showing basic features of SyntenyViewer https://www.youtube.com/watch?v=4fR_GPBdiqg

Launch Plant Synteny Viewer:


Access mode(s):

Web free access

Update: 29 Aug 2022
Creation date: 29 Feb 2012