Services
The URGI plant bioinformatics facility proposes services related to:
- data integration into the URGI information System GnpIS, data federation, training & guidelines of FAIR data management
- genomic annotation of Transposable Elements (TE), using a dedicated Virtual Research Environment (VRE) based on REPET suite
Services description in a nutshell:
- Data & Federation management - See dedicated pages:
- Support for data management
- Data publication into our Information System GnpIS
- Data federation portals in the frame of the international Wheat Initiative (WheatIS), the ELIXIR Plant Science Community (FAIDARE), and french Biologicial Resource Centers (RARe) communities.
- Knowledge graphs
- Training & Guidelines for FAIR data management
- Genomics Annotation - See dedicated page:
- Expertised annotation of transposable elements, via our REPET pipeline
- Virtual Research Environment specialized into TE annotation
All our services rely on the URGI IT infrastructure described in: Computer hardware
Applications to services are evaluated about once a month.
Update: 28 Nov 2025
Creation date: 25 Feb 2015
Creation date: 25 Feb 2015
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eZ PublishPublication supervisor: A-F. Adam-Blondon
Read Credits & General Terms of Use
Read How to cite