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Publications

ACL (papers with reading comittee)
ACL (papers with reading comittee) 23 Jun 2014 Ancestral repeats have shaped epigenome and genome composition for millions of years in Arabidopsis thaliana
Florian Maumus et al.
Nature communications
Little is known about the evolution of repeated sequences over long periods of time. ...
ACL (papers with reading comittee) 03 Jun 2014 Tedna: a Transposable Element De Novo Assembler.
Matthias Zytnicki et al.
Bioinformatics. 2014 Jun 3. pii: btu365PMID:24894500
MOTIVATION:
Recent technological advances are allowing many laboratories to sequence their research organisms. Available de ...
ACL (papers with reading comittee) 07 Apr 2014 Deep Investigation of Arabidopsis thaliana Junk DNA Reveals a Continuum between Repetitive Elements and Genomic Dark Matter
Florian Maumus et al.
PLoS ONE
Eukaryotic genomes contain highly variable amounts of DNA with no apparent function. This so-called ...
ACL (papers with reading comittee) 23 Jan 2014 Studying the organization of genes encoding plant cell wall degrading enzymes in Chrysomela tremula provides insights into a leaf beetle genome.
Pauchet Y et al.
Insect Mol Biol. 2014 Jun;23(3):286-300. doi: 10.1111/imb.12081. Epub 2014 Jan 23.
The ability of herbivorous beetles from the superfamilies Chrysomeloidea and Curculionoidea to degrade plant ...
ACL (papers with reading comittee) 18 Nov 2013 Distribution, evolution, and diversity of retrotransposons at the flamenco locus reflect the regulatory properties of piRNA clusters
Zanni V et al.
Proc Natl Acad Sci U S A. 2013 Nov 18.
Most of our understanding of Drosophila heterochromatin structure and evolution has come from the ...
ACL (papers with reading comittee) 16 Apr 2012 Mapping Reads on a Genomic Sequence: An Algorithmic Overwiew and a Practical Comparative Analysis
Sophie Schbath et al.
Journal of Computational Biology
Abstract Mapping short reads against a reference genome is classically the first step of ...
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Update: 06 May 2010
Creation date: 06 Apr 2010
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