All data uploaded to the site is made available to all project partners for the sole purpose of delivering the AGENT project goals. It should not be shared beyond the project without permission of the data generator. Data from this repository may be published via EURISCO and other interfaces under an open source licence at a later date, in accordance with the AGENT Data Management Plan.
Documentation:
- AGENT Portal URL & credentials, for AGENT partners
- AGENT guidelines for dataflow : new version 3.0 (April 2024)
- Helpdesk FAQ
- List of templates
SEEK ID: https://urgi.versailles.inrae.fr/fairdom/projects/3
Funding codes:- 862613
Public web page: https://www.agent-project.eu/
INRAE URGI PALs: No PALs for this Project
Project created: 8th Feb 2021
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- People (74)
- Institutions (18)
- Investigations (0+14)
- Studies (0+72)
- Assays (0+132)
- Data files (1+411)
- Models (1+16)
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Projects: H2020-AGENT
Institutions: ICARDA (The International Center for Agriculture Research in the Dry Areas)
Projects: H2020-AGENT
Institutions: WUR (Wageningen University & Research)
For further information: https://www.ebi.ac.uk/ena/browser/text-search?query=PRJEB51851
Creator: Sebastian Beier
Submitter: Junaid Altaf Memon
Investigations: 1 hidden item
Studies: 1 hidden item
Assays: 1 hidden item
Portable Data Analysis Pipeline
Creators: Reinhoud de Blok, Matthijs Brouwer
Submitter: Reinhoud de Blok
Model type: Not specified
Model format: Not specified
Environment: Not specified
Organism: Not specified
Investigations: 1 hidden item
Studies: 1 hidden item
Assays: 1 hidden item
This document is the user manual for the AGENT Portable Data Analysis Pipeline, a ready-packaged tool pipeline to support the analysis of large-scale genotyping data, with a particular focus on the genomics of genebanks. It has been developed as part of the AGENT project (http://www.agent-project.eu). This Manual describes the necessary setup to enable its use under Windows, macOS, and LINUX.
Creators: Reinhoud de Blok, Matthijs Brouwer
Submitter: Reinhoud de Blok
Investigations: 1 hidden item
Studies: 1 hidden item
Assays: 1 hidden item
This document is the installation manual for the AGENT Portable Data Analysis Pipeline, a ready-packaged tool pipeline to support the analysis of large-scale genotyping data, with a particular focus on the genomics of genebanks. It has been developed as part of the AGENT project (http://www.agent-project.eu). This Manual describes the necessary setup to enable its use under Windows, macOS, and LINUX for the AGENT 2nd Training workshop: "Training of trainers to enable local dissemination of knowledge ...
Creators: Reinhoud de Blok, Matthijs Brouwer, Matthias Lange
Submitter: Reinhoud de Blok
Investigations: 1 hidden item
Studies: 1 hidden item
Assays: 1 hidden item