| Analysis | rpsblast_cdd | Start | 82 |
| End | 165 | Strand | + |
| Length | 84 | Note | Gaps:1 |
| Hit Coverage | 98.81 | Hit Length | 84 |
| Hit Pident | 42.17 | E Val | 1e-22 |
| Hit Description | pfam03439 Spt5-NGN Early transcription elongation factor of RNA pol II NGN section. Spt5p and prokaryotic NusG are shown to contain a novel 'NGN' domain. The combined NGN and KOW motif regions of Spt5 form the binding domain with Spt4. Spt5 complexes with Spt4 as a 1:1 heterodimer snf this Spt5-Spt4 complex regulates early transcription elongation by RNA polymerase II and has an imputed role in pre-mRNA processing via its physical association with mRNA capping enzymes. The Schizosaccharomyces pombe core Spt5-Spt4 complex is a heterodimer bearing a trypsin-resistant Spt4-binding domain within the Spt5 subunit. | Hit Pcons | 13.25 |
| Name | Qrob_P0016970.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0016970.2 | Quercus robur | 93.3 | egn | (M=1) PTHR11125:SF8 - KOW DOMAIN-CONTAINING TRANSCRIPTION FACTOR 1 (PTHR11125:SF8) | validated |
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