| Analysis | rpsblast_cdd | Start | 82 |
| End | 166 | Strand | + |
| Length | 85 | Note | none |
| Hit Coverage | 98.84 | Hit Length | 86 |
| Hit Pident | 43.53 | E Val | 1e-29 |
| Hit Description | cd09888 NGN_Euk Eukaryotic N-Utilization Substance G (NusG) N-terminal (NGN) domain including plant KTF1 (KOW domain-containing Transcription Factor 1). The N-Utilization Substance G (NusG) protein and its eukaryotic homolog Spt5 are involved in transcription elongation and termination. NusG contains an NGN domain at its N-terminus and Kyrpides Ouzounis and Woese (KOW) repeats at its C-terminus. Spt5 forms an Spt4-Spt5 complex that is an essential RNA polymerase II elongation factor. NusG was originally discovered as an N-dependent antitermination enhancing activity in Escherichia coli and has a variety of functions such as its involvement in RNA polymerase elongation and Rho-termination in bacteria. Orthologs of the NusG gene exist in all bacteria but their functions and requirements are different. Spt5-like is homologous to the Spt5 proteins present in all eukaryotes which is unique as it encodes a protein with an additional long carboxy-terminal extension that contains WG/GW motifs. Spt5-like or KTF1 (KOW domain-containing Transcription Factor 1) is a RNA-directed DNA methylation (RdDM) pathway effector in plants. | Hit Pcons | 18.82 |
| Name | Qrob_P0016970.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0016970.2 | Quercus robur | 93.3 | egn | (M=1) PTHR11125:SF8 - KOW DOMAIN-CONTAINING TRANSCRIPTION FACTOR 1 (PTHR11125:SF8) | validated |
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