Protein : Qrob_P0760120.2 Q. robur
Protein Identifier  ? Qrob_P0760120.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=1) K11293 - protein HIRA/HIR1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 890  
Kegg Orthology  K11293
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0006351 transcription, DNA-templated The cellular synthesis of RNA on a template of DNA.
GO:0016568 chromatin modification The alteration of DNA, protein, or sometimes RNA, in chromatin, which may result in changing the chromatin structure.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102617233 1 876 + 876 Gaps:2 79.64 1100 85.27 0.0 protein HIRA-like
blastp_kegg lcl|cic:CICLE_v10027719mg 1 876 + 876 Gaps:4 79.60 1098 84.78 0.0 hypothetical protein
blastp_kegg lcl|vvi:100264905 1 876 + 876 Gaps:2 84.56 1036 84.02 0.0 protein HIRA-like
blastp_kegg lcl|pmum:103336095 1 876 + 876 Gaps:18 83.61 1031 86.89 0.0 protein HIRA
blastp_kegg lcl|pop:POPTR_0009s14710g 1 876 + 876 Gaps:7 83.75 1040 85.30 0.0 transducin family protein
blastp_kegg lcl|tcc:TCM_041451 1 878 + 878 Gaps:7 84.92 1028 86.03 0.0 Histone chaperone HIRA isoform 1
blastp_kegg lcl|pper:PRUPE_ppa000833mg 1 876 + 876 Gaps:18 87.34 987 86.54 0.0 hypothetical protein
blastp_kegg lcl|gmx:100806306 1 876 + 876 Gaps:5 84.68 1031 84.08 0.0 protein HIRA-like
blastp_kegg lcl|fve:101314247 1 876 + 876 Gaps:2 84.39 1038 83.33 0.0 protein HIRA-like
blastp_kegg lcl|pxb:103931940 1 876 + 876 Gaps:18 83.64 1033 85.65 0.0 protein HIRA-like
blastp_pdb 3fm0_A 11 198 + 188 Gaps:54 60.58 345 38.76 1e-13 mol:protein length:345 Protein CIAO1
blastp_pdb 3n0d_A 16 208 + 193 Gaps:77 89.21 315 41.99 1e-12 mol:protein length:315 WD repeat-containing protein 5
blastp_pdb 3n0e_A 16 208 + 193 Gaps:77 89.21 315 41.99 1e-12 mol:protein length:315 WD repeat-containing protein 5
blastp_pdb 2xl3_B 16 208 + 193 Gaps:79 84.43 334 42.20 3e-12 mol:protein length:334 WD REPEAT-CONTAINING PROTEIN 5
blastp_pdb 2xl3_A 16 208 + 193 Gaps:79 84.43 334 42.20 3e-12 mol:protein length:334 WD REPEAT-CONTAINING PROTEIN 5
blastp_pdb 2xl2_B 16 208 + 193 Gaps:79 84.43 334 42.20 3e-12 mol:protein length:334 WD REPEAT-CONTAINING PROTEIN 5
blastp_pdb 2xl2_A 16 208 + 193 Gaps:79 84.43 334 42.20 3e-12 mol:protein length:334 WD REPEAT-CONTAINING PROTEIN 5
blastp_pdb 2gnq_A 16 208 + 193 Gaps:79 83.93 336 42.20 3e-12 mol:protein length:336 WD-repeat protein 5
blastp_pdb 2co0_C 16 208 + 193 Gaps:60 86.03 315 38.38 3e-12 mol:protein length:315 WD-REPEAT PROTEIN 5
blastp_pdb 2cnx_A 16 208 + 193 Gaps:60 86.03 315 38.38 3e-12 mol:protein length:315 WD-REPEAT PROTEIN 5
blastp_uniprot_sprot sp|Q9LXN4|HIRA_ARATH 1 876 + 876 Gaps:11 84.67 1024 74.39 0.0 Protein HIRA OS Arabidopsis thaliana GN HIRA PE 1 SV 2
blastp_uniprot_sprot sp|Q652L2|HIRA_ORYSJ 1 876 + 876 Gaps:30 88.82 975 73.67 0.0 Protein HIRA OS Oryza sativa subsp. japonica GN Os09g0567700 PE 2 SV 1
blastp_uniprot_sprot sp|Q32SG6|HIRA_MAIZE 1 876 + 876 Gaps:31 89.52 964 72.07 0.0 Protein HIRA OS Zea mays PE 1 SV 1
blastp_uniprot_sprot sp|P54198|HIRA_HUMAN 5 874 + 870 Gaps:63 66.86 1017 37.21 2e-97 Protein HIRA OS Homo sapiens GN HIRA PE 1 SV 2
blastp_uniprot_sprot sp|Q61666|HIRA_MOUSE 5 874 + 870 Gaps:63 67.00 1015 37.21 3e-97 Protein HIRA OS Mus musculus GN Hira PE 1 SV 3
blastp_uniprot_sprot sp|O42611|HIRA_TAKRU 5 879 + 875 Gaps:81 67.02 1025 37.55 2e-96 Protein HIRA OS Takifugu rubripes GN hira PE 2 SV 1
blastp_uniprot_sprot sp|P79987|HIRA_CHICK 5 874 + 870 Gaps:61 67.12 1019 36.70 3e-96 Protein HIRA OS Gallus gallus GN HIRA PE 1 SV 2
blastp_uniprot_sprot sp|Q8QFR2|HIRA_XENLA 5 874 + 870 Gaps:73 67.13 1013 36.18 4e-95 Protein HIRA OS Xenopus laevis GN hira PE 1 SV 2
blastp_uniprot_sprot sp|O17468|HIRA_DROME 5 500 + 496 Gaps:76 42.22 1047 40.05 5e-89 Protein HIRA homolog OS Drosophila melanogaster GN Hira PE 1 SV 2
blastp_uniprot_sprot sp|Q6C553|HIR1_YARLI 1 875 + 875 Gaps:121 89.60 1058 29.01 1e-88 Protein HIR1 OS Yarrowia lipolytica (strain CLIB 122 / E 150) GN HIR1 PE 3 SV 2

32 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 689 876 188 PF07569 none TUP1-like enhancer of split IPR011494
PANTHER 436 880 445 PTHR13831 none none IPR031120
PANTHER 436 880 445 PTHR13831:SF0 none none none
ProSiteProfiles 9 44 36 PS50082 none Trp-Asp (WD) repeats profile. IPR001680
ProSiteProfiles 9 204 196 PS50294 none Trp-Asp (WD) repeats circular profile. IPR017986
PANTHER 305 417 113 PTHR13831:SF0 none none none
ProSiteProfiles 121 162 42 PS50082 none Trp-Asp (WD) repeats profile. IPR001680
ProSitePatterns 140 154 15 PS00678 none Trp-Asp (WD) repeats signature. IPR019775
Gene3D 306 376 71 G3DSA:2.130.10.10 none none IPR015943
Gene3D 12 272 261 G3DSA:2.130.10.10 none none IPR015943
PANTHER 305 417 113 PTHR13831 none none IPR031120
PANTHER 1 288 288 PTHR13831 none none IPR031120
ProSiteProfiles 62 92 31 PS50082 none Trp-Asp (WD) repeats profile. IPR001680
SMART 2 41 40 SM00320 none WD40 repeats IPR001680
SMART 55 94 40 SM00320 none WD40 repeats IPR001680
SMART 325 365 41 SM00320 none WD40 repeats IPR001680
SMART 250 322 73 SM00320 none WD40 repeats IPR001680
SMART 156 195 40 SM00320 none WD40 repeats IPR001680
SMART 114 153 40 SM00320 none WD40 repeats IPR001680
PANTHER 1 288 288 PTHR13831:SF0 none none none
SUPERFAMILY 306 362 57 SSF50978 none none IPR017986
SUPERFAMILY 15 272 258 SSF50978 none none IPR017986
ProSiteProfiles 163 204 42 PS50082 none Trp-Asp (WD) repeats profile. IPR001680
PRINTS 28 42 15 PR00320 none G protein beta WD-40 repeat signature IPR020472
PRINTS 309 323 15 PR00320 none G protein beta WD-40 repeat signature IPR020472
PRINTS 140 154 15 PR00320 none G protein beta WD-40 repeat signature IPR020472
Pfam 254 321 68 PF00400 none WD domain, G-beta repeat IPR001680
Pfam 158 194 37 PF00400 none WD domain, G-beta repeat IPR001680
Pfam 337 361 25 PF00400 none WD domain, G-beta repeat IPR001680
Pfam 115 153 39 PF00400 none WD domain, G-beta repeat IPR001680

0 Localization

0 Qtllist

0 Targeting