Protein : Qrob_P0412430.2 Q. robur
Protein Identifier  ? Qrob_P0412430.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K14856 - protein SDA1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 787  
Kegg Orthology  K14856
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0000055 ribosomal large subunit export from nucleus The directed movement of a ribosomal large subunit from the nucleus into the cytoplasm.
GO:0030036 actin cytoskeleton organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.
GO:0042273 ribosomal large subunit biogenesis A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a large ribosomal subunit; includes transport to the sites of protein synthesis.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103321875 8 786 + 779 Gaps:41 98.52 810 70.30 0.0 protein SDA1 homolog
blastp_kegg lcl|pper:PRUPE_ppa001562mg 8 786 + 779 Gaps:41 99.63 801 70.18 0.0 hypothetical protein
blastp_kegg lcl|vvi:100252440 2 786 + 785 Gaps:62 99.76 843 68.49 0.0 protein SDA1 homolog
blastp_kegg lcl|pop:POPTR_0008s18330g 7 786 + 780 Gaps:38 99.87 791 69.11 0.0 POPTRDRAFT_766605 SDA1 family protein
blastp_kegg lcl|mdm:103403088 8 786 + 779 Gaps:39 98.54 824 67.24 0.0 protein SDA1 homolog
blastp_kegg lcl|pxb:103949848 8 786 + 779 Gaps:32 98.53 819 66.17 0.0 protein SDA1 homolog
blastp_kegg lcl|gmx:100816774 6 786 + 781 Gaps:77 99.03 826 65.77 0.0 protein SDA1 homolog
blastp_kegg lcl|cit:102627573 1 786 + 786 Gaps:46 100.00 808 69.93 0.0 protein SDA1 homolog
blastp_kegg lcl|rcu:RCOM_1083180 2 786 + 785 Gaps:53 99.63 819 66.79 0.0 dentin sialophosphoprotein precursor putative
blastp_kegg lcl|pvu:PHAVU_001G256500g 6 786 + 781 Gaps:54 98.91 822 65.19 0.0 hypothetical protein
blastp_uniprot_sprot sp|Q9NVU7|SDA1_HUMAN 13 540 + 528 Gaps:51 76.42 687 38.10 4e-106 Protein SDA1 homolog OS Homo sapiens GN SDAD1 PE 1 SV 3
blastp_uniprot_sprot sp|A7S6A5|SDA1_NEMVE 15 768 + 754 Gaps:151 96.51 687 38.01 1e-102 Protein SDA1 homolog OS Nematostella vectensis GN sdad1 PE 3 SV 1
blastp_uniprot_sprot sp|Q5XIQ5|SDA1_RAT 13 539 + 527 Gaps:51 76.09 686 39.46 2e-101 Protein SDA1 homolog OS Rattus norvegicus GN Sdad1 PE 2 SV 1
blastp_uniprot_sprot sp|Q80UZ2|SDA1_MOUSE 13 539 + 527 Gaps:52 76.13 687 39.20 4e-100 Protein SDA1 homolog OS Mus musculus GN Sdad1 PE 1 SV 1
blastp_uniprot_sprot sp|A5D7C2|SDA1_BOVIN 13 540 + 528 Gaps:52 76.45 688 37.83 1e-96 Protein SDA1 homolog OS Bos taurus GN SDAD1 PE 2 SV 1
blastp_uniprot_sprot sp|A4IIB1|SDA1_XENTR 13 551 + 539 Gaps:51 77.79 689 38.25 2e-95 Protein SDA1 homolog OS Xenopus tropicalis GN sdad1 PE 2 SV 1
blastp_uniprot_sprot sp|Q2VPG3|SDA1_XENLA 13 551 + 539 Gaps:51 77.79 689 37.50 6e-93 Protein SDA1 homolog OS Xenopus laevis GN sdad1 PE 2 SV 1
blastp_uniprot_sprot sp|Q7KKH3|SDA1_DROME 21 786 + 766 Gaps:115 98.46 712 36.09 7e-88 Protein SDA1 homolog OS Drosophila melanogaster GN Mys45A PE 1 SV 1
blastp_uniprot_sprot sp|Q55DE2|SDA1_DICDI 20 504 + 485 Gaps:48 63.62 756 35.34 2e-80 Protein SDA1 homolog OS Dictyostelium discoideum GN sdad1 PE 3 SV 1
blastp_uniprot_sprot sp|Q10342|SDA1_SCHPO 21 770 + 750 Gaps:175 96.38 719 34.05 6e-66 Protein sda1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN sda1 PE 3 SV 2
rpsblast_cdd gnl|CDD|191252 427 785 + 359 Gaps:56 100.00 317 37.85 4e-63 pfam05285 SDA1 SDA1. This family consists of several SDA1 protein homologues. SDA1 is a Saccharomyces cerevisiae protein which is involved in the control of the actin cytoskeleton. The protein is essential for cell viability and is localised in the nucleus.
rpsblast_cdd gnl|CDD|191954 85 135 + 51 none 98.08 52 43.14 5e-10 pfam08158 NUC130_3NT NUC130/3NT domain. This N terminal domain is found in a novel nucleolar protein family.
rpsblast_cdd gnl|CDD|202909 499 604 + 106 Gaps:1 12.98 809 27.62 8e-07 pfam04147 Nop14 Nop14-like family. Emg1 and Nop14 are novel proteins whose interaction is required for the maturation of the 18S rRNA and for 40S ribosome production.
rpsblast_kog gnl|CDD|37440 85 786 + 702 Gaps:128 99.68 616 43.81 1e-160 KOG2229 KOG2229 KOG2229 Protein required for actin cytoskeleton organization and cell cycle progression [Cell cycle control cell division chromosome partitioning Cytoskeleton].

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 6 784 779 PTHR12730 none none none
SUPERFAMILY 320 457 138 SSF48371 none none IPR016024
SUPERFAMILY 83 246 164 SSF48371 none none IPR016024
Pfam 427 785 359 PF05285 none SDA1 IPR007949
Pfam 85 135 51 PF08158 none NUC130/3NT domain IPR012977
Coils 287 311 25 Coil none none none
PANTHER 6 784 779 PTHR12730:SF0 none none IPR027312

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting