Protein : Qrob_P0093200.2 Q. robur
Protein Identifier  ? Qrob_P0093200.2 Organism . Name  Quercus robur
Score  22.2 Score Type  egn
Protein Description  (M=34) K15032 - mTERF domain-containing protein, mitochondrial Gene Prediction Quality  validated
Protein length 

Sequence

Length: 419  
Kegg Orthology  K15032
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003690 double-stranded DNA binding Interacting selectively and non-covalently with double-stranded DNA.
GO:0005739 mitochondrion A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

13 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103437555 1 413 + 413 Gaps:48 98.69 459 55.85 2e-172 uncharacterized LOC103437555
blastp_kegg lcl|pxb:103938232 1 416 + 416 Gaps:48 99.35 459 54.82 5e-171 uncharacterized LOC103938232
blastp_kegg lcl|cit:102611574 47 412 + 366 Gaps:3 81.21 447 60.33 9e-160 uncharacterized LOC102611574
blastp_kegg lcl|cic:CICLE_v10020122mg 47 412 + 366 Gaps:3 80.85 449 60.61 1e-159 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1506670 1 418 + 418 Gaps:79 100.00 423 57.21 7e-155 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa015858mg 1 412 + 412 Gaps:39 77.45 510 56.20 6e-135 hypothetical protein
blastp_kegg lcl|pmum:103338215 47 412 + 366 Gaps:20 98.15 325 66.77 5e-134 uncharacterized LOC103338215
blastp_kegg lcl|tcc:TCM_004562 31 411 + 381 Gaps:7 77.61 402 49.68 2e-77 Mitochondrial transcription termination factor family protein
blastp_kegg lcl|rcu:RCOM_0555350 49 410 + 362 Gaps:7 81.17 377 49.35 6e-74 hypothetical protein
blastp_kegg lcl|pop:POPTR_0014s12770g 108 411 + 304 Gaps:1 76.25 400 42.95 2e-73 POPTRDRAFT_897202 hypothetical protein
rpsblast_cdd gnl|CDD|202273 47 384 + 338 Gaps:12 98.55 345 37.35 3e-28 pfam02536 mTERF mTERF. This family contains one sequence of known function Human mitochondrial transcription termination factor (mTERF) the rest of the family consists of hypothetical proteins none of which have any functional information. mTERF is a multizipper protein possessing three putative leucine zippers one of which is bipartite. The protein binds DNA as a monomer. The leucine zippers are not implicated in a dimerisation role as in other leucine zippers.
rpsblast_cdd gnl|CDD|178738 42 354 + 313 Gaps:81 64.48 487 24.20 2e-11 PLN03196 PLN03196 MOC1-like protein Provisional.
rpsblast_kog gnl|CDD|36481 47 366 + 320 Gaps:27 83.54 413 36.23 4e-21 KOG1267 KOG1267 KOG1267 Mitochondrial transcription termination factor mTERF [Transcription General function prediction only].

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 101 410 310 PTHR13068 none none none
SMART 92 119 28 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 266 296 31 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 124 155 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 301 332 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 160 191 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 56 87 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 333 367 35 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 196 227 32 SM00733 none Mitochondrial termination factor repeats IPR003690
Pfam 279 385 107 PF02536 none mTERF IPR003690
Pfam 47 106 60 PF02536 none mTERF IPR003690
Pfam 113 279 167 PF02536 none mTERF IPR003690
PANTHER 101 410 310 PTHR13068:SF15 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 65   Mitochondrion 4 0.081 0.643 NON-PLANT 65