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Repet Tools

Annotation service tools


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PASTEClassifier
The PASTEClassifier (Pseudo Agent System for Transposable Elements Classification) is a transposable element (TE) classifier searching for structural features and similarity to classify TEs (Hoede C. et al. 2014). It browses the whole spectrum of ...

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panREPET
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panREPET is described in this preprint available on BioRxiv
Project information
panREPET is a pipeline detecting shared Transposable Element (TE) insertions among a pangenome. It takes in charge multiple de novo whole-genome assemblies of the same species. It compares TE copies between each pair ...

Update: 21 Feb 2025
Creation date: 29 Jul 2024



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