Genomic sequences

• LM_supctg_v2.fsa.gz (12.72 MB) L. maculans Supercontigs sequences
• LM_ctg_v2.fsa.gz (12.70 MB) L. maculans contigs sequences (virtual contigs extracted from supercontigs after final assembly they are separated by gap of at least one nucleotide N)
• LM_bes.fsa.gz (5.99 MB) L. maculans Bac End Sequences

Genes (last update 06 february 2012, with 142 new gene predictions, 2 partials without sequence in fasta files)

• LM_orfnucall_1.fsa.gz (4.84 MB) L. maculans predicted genes:
  It contains reliable and unreliable Eugene predicted gene (without UTRs)
  Lema_Pxxxxxx.1 : gene with length > 300 Nucl OR (gene with length < 300 aa with EST Evidence)
  Lema_uPxxxxxx.1 : gene with length < 300 aa without EST evidence (at the time of prediction pipeline))
• lm_supctg_v2.genecds.gff.gz (936.19 kB) GFF file for predicted genes (without UTRs)

• LM_orfprotall_1.fsa.gz (3.14 MB) L. maculans predicted protein:
  It contains reliable and unreliable Eugene predicted protein
  Lema_Pxxxxxx.1 : protein with length > 100 aa OR (protein with length < 100 aa with EST Evidence)
  Lema_uPxxxxxx.1 : protein with length < 100 aa without EST evidence (at the time of prediction pipeline))
• lm_supctg_v2.gene.gff.gz (981.28 kB) GFF file for predicted genes (including UTRs)

Transposable Elements

• TEs_Leptosphaeria_species_complex.fa.gz (142.42 kB) Transposable Elements of the Leptosphaeria species complex

Supplementary downloads

• lm_supctg_v2_ctg.gff.gz (33.06 kB) Gff file for L. maculans contigs mapping on supercontig
• lm_ctg_vs_supctg_v2.gz (20.11 kB) L. maculans contigs mapping on supercontig
• lm_supctg_v2.size.gz (338 B)  L. maculans supercontigs length
• lm_ctg_v2.size.gz (9.08 kB)  L. maculans contigs length
• lm_blast2go.dat.gz (15.79 MB) L. maculans blast2go project

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