National,  COM (talks)

JOBIM 2011, Paris

29 Jun 2011   URGI Genome Annotation System: an Integrated System for Structural and Functional Genome Annotation

Amselem J , Alaux M, Choisne N, Lapalu N, Brault B, Keliet A, Kimmel E, Alfama-Depauw F, Arnoux S, Bras M, BrigitteL , Inizan O, Jamilloux V, Kreplak J, Legeai F, Luyten I, Pommier, C Reboux, S Sidibe-Bocs S, Lebrun MH, Steinbach D, Quesneville H.

The URGI platform develops a genome annotation
system dedicated to plants and their pathogens. This Integrated System relies on: (i) pipelines
for Transposable Elements annotation (REPET) and gene structural and functional predictions
(ii) databases and user-friendly interfaces to browse and query the data (URGI Information
System GnpIS, Genome Report System GRS), (iii) A distributed annotation system for curation
of gene structure.