GRS - Genome Report System

Sclerotinia sclerotiorum GRS

Functional annotation

SS1G_08813.1

Gene Identifier

Domain/Motif (Interproscan results)

Localization / Targeting

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	ssl:SS1G_08813	1	1129	1129	n/a	100.00	1129	92.65	0.00	0.0	hypothetical protein K01530 phospholipid-translocating ATPase [EC:3.6.3.1]
	bfu:BC1G_09245	1	1101	1101	Gaps:47	83.38	1318	86.99	2.46	0.0	hypothetical protein K01530 phospholipid-translocating ATPase [EC:3.6.3.1]
	mgr:MGG_12922	1	1101	1101	Gaps:79	87.70	1341	67.52	8.16	0.0	hypothetical protein K01530 phospholipid-translocating ATPase [EC:3.6.3.1]
	fgr:FG06743.1	1	1101	1101	Gaps:11	84.08	1363	70.77	8.12	0.0	hypothetical protein K01530 phospholipid-translocating ATPase [EC:3.6.3.1]
	ure:UREG_00777	1	1101	1101	Gaps:16	82.25	1358	72.61	8.68	0.0	similar to ATPase K01530 phospholipid-translocating ATPase [EC:3.6.3.1]
	ncr:NCU00352	1	1101	1101	Gaps:23	83.09	1360	71.95	9.03	0.0	similar to phospholipid-transporting ATPase K01530 phospholipid-translocating ATPase [EC:3.6.3.1]
	cim:CIMG_00808	1	1101	1101	Gaps:11	81.11	1355	72.25	9.19	0.0	hypothetical protein K01530 phospholipid-translocating ATPase [EC:3.6.3.1]
	pan:PODANSg4879	10	1101	1092	Gaps:14	82.04	1353	70.81	9.19	0.0	hypothetical protein K01530 phospholipid-translocating ATPase [EC:3.6.3.1]
	pcs:Pc13g03700	1	1101	1101	Gaps:33	85.59	1360	67.53	10.48	0.0	Pc13g03700 (EC:3.6.3.8) K01530 phospholipid-translocating ATPase [EC:3.6.3.1]
	act:ACLA_080690	10	1109	1100	Gaps:24	83.16	1360	69.94	9.46	0.0	phospholipid-transporting ATPase putative K01530 phospholipid-translocating ATPase [EC:3.6.3.1]
blastp_uniprot_sprot	sp\|P39524\|ATC3_YEAST	72	1101	1030	Gaps:19	75.65	1355	59.12	14.83	0.0	Probable phospholipid-transporting ATPase DRS2 OS Saccharomyces cerevisiae GN DRS2 PE 1 SV 1
	sp\|O94296\|YOOC_SCHPO	67	1097	1031	Gaps:29	86.88	1258	57.37	15.00	0.0	Probable phospholipid-transporting ATPase C887.12 OS Schizosaccharomyces pombe GN SPBC887.12 PE 2 SV 1
	sp\|Q9Y2Q0\|AT8A1_HUMAN	73	1096	1024	Gaps:79	89.95	1164	46.32	16.62	0.0	Probable phospholipid-transporting ATPase IA OS Homo sapiens GN ATP8A1 PE 1 SV 1
	sp\|P70704\|AT8A1_MOUSE	73	1096	1024	Gaps:88	89.82	1149	46.90	16.76	0.0	Probable phospholipid-transporting ATPase IA OS Mus musculus GN Atp8a1 PE 1 SV 1
	sp\|Q29449\|AT8A1_BOVIN	73	1096	1024	Gaps:90	89.82	1149	46.80	16.76	0.0	Probable phospholipid-transporting ATPase IA OS Bos taurus GN ATP8A1 PE 1 SV 2
	sp\|P98200\|AT8A2_MOUSE	73	1100	1028	Gaps:47	88.33	1148	45.66	16.67	0.0	Probable phospholipid-transporting ATPase IB OS Mus musculus GN Atp8a2 PE 1 SV 1
	sp\|Q9NTI2\|AT8A2_HUMAN	73	1100	1028	Gaps:49	88.33	1148	45.86	16.67	0.0	Probable phospholipid-transporting ATPase IB OS Homo sapiens GN ATP8A2 PE 2 SV 2
	sp\|Q9XIE6\|ALA3_ARATH	73	1043	971	Gaps:80	89.53	1213	40.61	17.22	0.0	Phospholipid-transporting ATPase 3 OS Arabidopsis thaliana GN ALA3 PE 1 SV 2
	sp\|P98198\|AT8B2_HUMAN	65	922	858	Gaps:65	73.04	1209	43.37	16.19	0.0	Probable phospholipid-transporting ATPase ID OS Homo sapiens GN ATP8B2 PE 1 SV 2
	sp\|P98199\|AT8B2_MOUSE	65	922	858	Gaps:65	73.04	1209	43.49	15.97	0.0	Probable phospholipid-transporting ATPase ID OS Mus musculus GN Atp8b2 PE 2 SV 2
blastp_pdb	3ixz_A	436	914	479	Gaps:100	41.49	1034	27.74	15.85	4e-10	mol:protein length:1034 Potassium-transporting ATPase alpha
rpsblast_cdd	gnl\|CDD\|162465	88	1039	952	Gaps:41	94.32	1057	48.55	18.46	0.0	TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
	gnl\|CDD\|30822	80	1035	956	Gaps:247	91.71	917	27.82	15.93	1e-125	COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism].
	gnl\|CDD\|162389	138	921	784	Gaps:173	96.59	499	35.68	18.05	2e-46	TIGR01494 ATPase_P-type ATPase P-type (transporting) HAD superfamily subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493 TIGR01509 TIGR01549 TIGR01544 and TIGR01545). Based on these classifications the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
	gnl\|CDD\|162469	87	975	889	Gaps:226	75.62	1054	24.34	17.82	5e-30	TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
	gnl\|CDD\|130580	445	881	437	Gaps:122	36.03	941	31.56	19.76	5e-27	TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
	gnl\|CDD\|162209	436	874	439	Gaps:94	42.64	917	28.39	14.58	3e-19	TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types SERCA and PMR1 the latter of which is modelled by TIGR01522.
	gnl\|CDD\|130585	104	877	774	Gaps:232	68.33	884	28.64	17.72	1e-18	TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types SERCA and PMR1 the former of which is modelled by TIGR01116.
	gnl\|CDD\|130586	145	877	733	Gaps:175	65.72	1053	23.99	17.92	2e-16	TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase fungal-type. The Leishmania sequence (GP\|3192903) which falls between trusted and noise in this model may very well turn out to be an active potassium pump.
	gnl\|CDD\|130176	444	877	434	Gaps:104	38.31	997	31.15	16.75	3e-14	TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter P-type ATPase alpha subunit. Sequences from Blastocladiella emersonii (GP\|6636502 GP\|6636502 and PIR\|T43025) C. elegans (GP\|2315419 GP\|6671808 and PIR\|T31763) and Drosophila melanogaster (GP\|7291424) score below trusted cutoff apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage but most likely calcium pumps.
	gnl\|CDD\|170493	592	893	302	Gaps:86	26.19	901	27.97	20.76	2e-08	PRK10517 PRK10517 magnesium-transporting ATPase MgtA Provisional.
rpsblast_kog	gnl\|CDD\|35427	71	1088	1018	Gaps:139	98.44	1151	44.22	14.30	0.0	KOG0206 KOG0206 KOG0206 P-type ATPase [General function prediction only].
	gnl\|CDD\|35431	29	920	892	Gaps:68	79.73	1051	35.20	21.00	1e-154	KOG0210 KOG0210 KOG0210 P-type ATPase [Inorganic ion transport and metabolism].
	gnl\|CDD\|35425	144	881	738	Gaps:202	56.87	1034	30.95	15.99	2e-36	KOG0204 KOG0204 KOG0204 Calcium transporting ATPase [Inorganic ion transport and metabolism].
	gnl\|CDD\|35423	106	877	772	Gaps:159	68.21	972	27.75	15.38	9e-33	KOG0202 KOG0202 KOG0202 Ca2+ transporting ATPase [Inorganic ion transport and metabolism].
	gnl\|CDD\|35429	456	874	419	Gaps:72	36.23	1140	26.15	17.43	2e-24	KOG0208 KOG0208 KOG0208 Cation transport ATPase [Inorganic ion transport and metabolism].
	gnl\|CDD\|35430	182	865	684	Gaps:150	49.48	1160	24.22	19.69	4e-21	KOG0209 KOG0209 KOG0209 P-type ATPase [Inorganic ion transport and metabolism].
	gnl\|CDD\|35424	444	867	424	Gaps:91	36.80	1019	30.40	14.67	4e-20	KOG0203 KOG0203 KOG0203 Na+/K+ ATPase alpha subunit [Inorganic ion transport and metabolism].

Other analysis

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