GRS - Genome Report System

Sclerotinia sclerotiorum GRS

Functional annotation

SS1G_03747.1

Gene Identifier

Domain/Motif (Interproscan results)

Localization / Targeting

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	ssl:SS1G_03747	1	596	596	n/a	100.00	596	94.13	0.00	0.0	hypothetical protein
	bfu:BC1G_04126	1	555	555	Gaps:22	96.65	597	86.48	4.51	0.0	hypothetical protein
	fgr:FG07894.1	7	554	548	Gaps:10	95.42	568	70.66	11.62	0.0	similar to T43734 phosphate transport protein [imported] - Gibberella zeae (subsp. graminearum)
	ssl:SS1G_11184	20	553	534	Gaps:6	92.94	581	71.85	10.37	0.0	hypothetical protein
	bfu:BC1G_08663	20	553	534	Gaps:6	92.15	586	71.11	10.37	0.0	hypothetical protein
	pan:PODANSg7185	20	553	534	Gaps:3	92.88	576	68.41	12.15	0.0	hypothetical protein
	ncr:NCU08325	21	553	533	Gaps:4	93.86	570	69.35	9.91	0.0	inorganic phosphate transporter PHO84 K08176 MFS transporter PHS family inorganic phosphate transporter
	cim:CIMG_00339	23	553	531	Gaps:6	91.48	587	67.78	13.59	0.0	hypothetical protein
	ure:UREG_00405	23	553	531	Gaps:6	91.95	584	67.78	12.85	0.0	phosphate:H+ symporter
	tml:GSTUM_00000548001	20	555	536	Gaps:3	93.35	571	66.98	12.76	0.0	hypothetical protein
blastp_uniprot_sprot	sp\|P25297\|PHO84_YEAST	21	551	531	Gaps:12	91.14	587	56.07	12.90	1e-168	Inorganic phosphate transporter PHO84 OS Saccharomyces cerevisiae GN PHO84 PE 1 SV 2
	sp\|Q8GSD9\|PHT12_ORYSJ	51	554	504	Gaps:33	96.02	528	35.50	18.15	1e-82	Inorganic phosphate transporter 1-2 OS Oryza sativa subsp. japonica GN PTH1-2 PE 2 SV 1
	sp\|Q9ZWT3\|PHT16_ARATH	44	553	510	Gaps:38	97.29	516	37.85	16.53	4e-81	Probable inorganic phosphate transporter 1-6 OS Arabidopsis thaliana GN PHT1-6 PE 2 SV 1
	sp\|Q8GYF4\|PHT15_ARATH	45	554	510	Gaps:27	95.39	542	36.75	16.63	6e-80	Probable inorganic phosphate transporter 1-5 OS Arabidopsis thaliana GN PHT1-5 PE 2 SV 2
	sp\|Q8VYM2\|PHT11_ARATH	45	553	509	Gaps:31	98.09	524	37.74	17.90	7e-80	Inorganic phosphate transporter 1-1 OS Arabidopsis thaliana GN PHT1-1 PE 1 SV 2
	sp\|Q7XDZ7\|PHT13_ORYSJ	51	554	504	Gaps:27	96.77	526	35.76	17.29	2e-79	Probable inorganic phosphate transporter 1-3 OS Oryza sativa subsp. japonica GN PHT1-3 PE 2 SV 1
	sp\|Q8H6H2\|PHT14_ORYSJ	51	554	504	Gaps:34	94.42	538	36.22	17.52	2e-79	Probable inorganic phosphate transporter 1-4 OS Oryza sativa subsp. japonica GN PHT1-4 PE 2 SV 1
	sp\|Q96303\|PHT14_ARATH	46	552	507	Gaps:27	96.25	534	34.24	18.68	3e-79	Inorganic phosphate transporter 1-4 OS Arabidopsis thaliana GN PHT1-4 PE 1 SV 1
	sp\|Q01MW8\|PHT14_ORYSI	51	554	504	Gaps:34	94.42	538	36.22	17.52	3e-79	Probable inorganic phosphate transporter 1-4 OS Oryza sativa subsp. indica GN PHT1-4 PE 2 SV 2
	sp\|Q494P0\|PHT17_ARATH	51	554	504	Gaps:40	94.58	535	35.57	18.97	6e-79	Probable inorganic phosphate transporter 1-7 OS Arabidopsis thaliana GN PHT1-7 PE 2 SV 2
blastp_pdb	no results
rpsblast_cdd	gnl\|CDD\|129965	50	553	504	Gaps:12	100.00	502	60.36	12.55	0.0	TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
	gnl\|CDD\|143864	67	548	482	Gaps:68	98.44	449	24.21	19.23	2e-32	pfam00083 Sugar_tr Sugar (and other) transporter.
	gnl\|CDD\|162084	61	548	488	Gaps:68	94.80	481	21.93	13.60	6e-21	TIGR00879 SP MFS transporter sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083).
	gnl\|CDD\|162095	50	504	455	Gaps:75	99.50	398	26.52	19.70	3e-18	TIGR00895 2A0115 benzoate transport.
	gnl\|CDD\|162097	118	548	431	Gaps:76	72.28	505	26.03	18.08	7e-18	TIGR00898 2A0119 cation transport protein.
	gnl\|CDD\|119392	67	540	474	Gaps:33	92.33	352	22.15	18.15	1e-12	cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters symporters and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions sugar phosphates drugs neurotransmitters nucleosides amino acids and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate while symporters and antiporters transport two substrates in the same or in opposite directions respectively across membranes. MFS proteins are typically 400 to 600 amino acids in length and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members GlpT (glycerol-3-phosphate transporter) LacY (lactose permease) and EmrD (multidrug transporter) MFS proteins are thought to function through a single substrate binding site alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4 which is impaired in type II diabetes and glucose-6-phosphate transporter (G6PT) which causes glycogen storage disease when mutated..
	gnl\|CDD\|162087	73	503	431	Gaps:85	92.89	394	25.14	16.39	3e-12	TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083) including citrate-H+ symporters dicarboxylate:H+ symporters the proline/glycine-betaine transporter ProP etc.
	gnl\|CDD\|130366	69	368	300	Gaps:69	40.30	742	25.75	17.73	8e-11	TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
	gnl\|CDD\|148990	116	497	382	Gaps:81	87.83	345	20.79	19.14	4e-10	pfam07690 MFS_1 Major Facilitator Superfamily.
	gnl\|CDD\|170237	113	552	440	Gaps:75	85.63	487	23.50	17.99	9e-10	PRK10077 xylE D-xylose transporter XylE Provisional.
rpsblast_kog	gnl\|CDD\|35473	31	563	533	Gaps:31	94.80	538	41.57	15.10	1e-132	KOG0252 KOG0252 KOG0252 Inorganic phosphate transporter [Inorganic ion transport and metabolism].
	gnl\|CDD\|35475	21	548	528	Gaps:78	95.91	513	19.11	16.67	3e-26	KOG0254 KOG0254 KOG0254 Predicted transporter (major facilitator superfamily) [General function prediction only].
	gnl\|CDD\|35476	117	547	431	Gaps:61	71.40	521	22.85	16.94	4e-23	KOG0255 KOG0255 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only].
	gnl\|CDD\|35789	64	553	490	Gaps:69	94.64	485	22.00	20.26	4e-21	KOG0569 KOG0569 KOG0569 Permease of the major facilitator superfamily [Carbohydrate transport and metabolism].
	gnl\|CDD\|35474	35	543	509	Gaps:87	89.39	528	22.88	17.37	2e-19	KOG0253 KOG0253 KOG0253 Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only].
	gnl\|CDD\|37744	117	510	394	Gaps:58	69.90	495	19.94	13.58	5e-07	KOG2533 KOG2533 KOG2533 Permease of the major facilitator superfamily [Carbohydrate transport and metabolism].

Other analysis

Functional Gbrowse

Ortholog