GRS - Genome Report System

Leptosphaeria maculans GRS

Functional annotation

Lema_P100820.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	aor:AO090009000275	2	507	506	n/a	92.24	541	62.32	15.23	0.0	predicted transporter (major facilitator superfamily)
	ang:An01g08780	2	507	506	n/a	90.74	540	63.67	14.49	0.0	hypothetical protein
	aor:AO090001000061	1	503	503	n/a	88.64	537	63.24	15.34	0.0	predicted transporter (major facilitator superfamily)
	nfi:NFIA_103270	2	507	506	n/a	92.88	548	63.46	13.95	0.0	MFS monosaccharide transporter putative
	ani:AN4148.2	2	507	506	n/a	92.88	548	62.67	14.93	0.0	hypothetical protein
	afm:AFUA_4G13080	2	507	506	n/a	92.88	548	63.06	13.95	0.0	MFS monosaccharide transporter
	ncr:NCU01132	1	475	475	n/a	84.45	553	63.81	14.35	0.0	similar to monosaccharide transporter
	ssl:SS1G_10413	4	501	498	n/a	89.11	551	59.47	16.50	0.0	hypothetical protein
	fgr:FG01484.1	2	515	514	n/a	90.73	550	60.12	15.63	0.0	hypothetical protein
	mgr:MGG_04780	3	502	500	n/a	89.12	524	64.03	14.78	0.0	hypothetical protein
blastp_uniprot_sprot	sp\|P39932\|STL1_YEAST	5	473	469	n/a	76.27	569	44.01	17.28	1e-108	Sugar transporter STL1 OS Saccharomyces cerevisiae GN STL1 PE 1 SV 2
	sp\|P49374\|HGT1_KLULA	16	511	496	n/a	69.69	551	34.38	20.05	3e-53	High-affinity glucose transporter OS Kluyveromyces lactis GN HGT1 PE 3 SV 1
	sp\|P11636\|QAY_NEUCR	17	473	457	n/a	68.72	537	34.15	20.05	6e-49	Quinate permease OS Neurospora crassa GN qa-y PE 3 SV 2
	sp\|P10870\|SNF3_YEAST	8	492	485	n/a	42.08	884	34.14	21.51	6e-47	High-affinity glucose transporter SNF3 OS Saccharomyces cerevisiae GN SNF3 PE 1 SV 3
	sp\|P53387\|KHT2_KLULA	26	480	455	n/a	67.31	566	33.86	19.95	2e-46	Hexose transporter 2 OS Kluyveromyces lactis GN KHT2 PE 3 SV 1
	sp\|P23585\|HXT2_YEAST	26	480	455	n/a	68.95	541	34.32	21.98	1e-45	High-affinity glucose transporter HXT2 OS Saccharomyces cerevisiae GN HXT2 PE 1 SV 1
	sp\|Q9C757\|INT2_ARATH	14	484	471	n/a	71.03	580	33.74	18.20	2e-45	Probable inositol transporter 2 OS Arabidopsis thaliana GN INT2 PE 2 SV 1
	sp\|Q4U3U6\|QAY_NEUAF	17	473	457	n/a	65.49	536	35.04	18.80	9e-45	Quinate permease OS Neurospora africana GN qa-y PE 3 SV 1
	sp\|Q4U3U4\|QAY_NEUTR	17	473	457	n/a	64.74	536	34.58	19.60	6e-44	Quinate permease OS Neurospora terricola GN qa-y PE 3 SV 1
	sp\|P43581\|HXT10_YEAST	26	480	455	n/a	68.32	546	33.51	21.18	1e-43	Hexose transporter HXT10 OS Saccharomyces cerevisiae GN HXT10 PE 1 SV 1
blastp_pdb	no results
rpsblast_cdd	gnl\|CDD\|109151	17	473	457	Gaps:14	99.78	450	36.30	21.16	1e-88	pfam00083 Sugar_tr Sugar (and other) transporter.
	gnl\|CDD\|129957	12	469	458	Gaps:19	95.01	481	35.23	20.57	1e-79	TIGR00879 SP This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083).
	gnl\|CDD\|137671	14	477	464	Gaps:50	97.12	486	26.27	20.34	5e-46	PRK10077 xylE D-xylose transporter XylE Provisional.
	gnl\|CDD\|129976	68	468	401	Gaps:45	74.46	505	24.73	17.02	5e-18	TIGR00898 2A0119
	gnl\|CDD\|129965	2	470	469	Gaps:101	98.41	502	23.68	16.80	5e-16	TIGR00887 2A0109 This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
rpsblast_kog	gnl\|CDD\|35475	5	482	478	Gaps:19	92.20	513	32.14	18.82	9e-66	KOG0254 KOG0254 KOG0254 Predicted transporter (major facilitator superfamily) [General function prediction only].
	gnl\|CDD\|35789	9	479	471	Gaps:15	96.91	485	27.23	21.49	2e-56	KOG0569 KOG0569 KOG0569 Permease of the major facilitator superfamily [Carbohydrate transport and metabolism].
	gnl\|CDD\|35476	65	468	404	Gaps:28	74.09	521	21.50	18.13	1e-25	KOG0255 KOG0255 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only].
	gnl\|CDD\|35473	18	470	453	Gaps:73	86.62	538	24.25	15.67	1e-24	KOG0252 KOG0252 KOG0252 Inorganic phosphate transporter [Inorganic ion transport and metabolism].
	gnl\|CDD\|35474	53	466	414	Gaps:62	81.06	528	19.63	14.02	2e-10	KOG0253 KOG0253 KOG0253 Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only].

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
blastx_uniprot_trembl	Q2UUL0	747981	749798	541	63.18	91.87	n/a	Predicted transporter - Aspergillus oryzae
	Q2UP94	747978	749816	537	61.31	93.85	n/a	Predicted transporter - Aspergillus oryzae
	Q5ARV8	748113	749750	743	61.09	61.91	n/a	Putative uncharacterized protein - Emericella nidulans (Aspergillus nidulans)
	Q6BY51	747987	749714	552	57.26	84.78	n/a	Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces hansenii - Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
	A7EYJ7	748264	749744	551	58.31	77.50	n/a	Putative uncharacterized protein - Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
	Q6CBQ5	747987	749783	578	55.09	86.68	n/a	Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica - Yarrowia lipolytica (Candida lipolytica)
	Q6BWB1	747987	749711	561	53.96	83.24	n/a	Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii - Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
	Q6CAP1	748258	749711	592	54.83	75.17	n/a	Similar to tr:Q9P702 Neurospora crassa Probable sugar transporter - Yarrowia lipolytica (Candida lipolytica)
	Q4PE07	748264	749774	570	53.33	76.32	n/a	Putative uncharacterized protein - Ustilago maydis (Smut fungus)
	Q2UP94	747978	749816	537	61.31	93.85	n/a	Predicted transporter - Aspergillus oryzae
	Q0C7Q2	747972	749825	548	61.63	91.79	n/a	Putative uncharacterized protein - Aspergillus terreus (strain NIH 2624)
blastx_FNG31_prot	AO090009000275	747981	749798	541	63.18	91.87	n/a	Aspergillus oryzae predicted transporter major facilitator superfamily
	AO090001000061	747978	749816	537	61.31	93.85	n/a	Aspergillus oryzae predicted transporter major facilitator superfamily
	AN8972	748113	749750	743	61.09	61.91	n/a	Aspergillus nidulans AN8972.3 conserved hypothetical protein translation 744 aa
	gi:50409380:ref:XP_456868.1	747987	749714	552	57.26	84.78	n/a	Debaryomyces hansenii CBS767 hypothetical protein DEHA0A12815g
	SS1G_10413.1	748264	749744	551	58.31	77.50	n/a	sclerotinia_sclerotiorum hypothetical protein translation 552 aa
	gi:50548875:ref:XP_501907.1	747987	749783	578	55.09	86.68	n/a	Yarrowia lipolytica hypothetical protein
	gi:50415933:ref:XP_457508.1	747987	749711	561	53.96	83.24	n/a	Debaryomyces hansenii CBS767 hypothetical protein DEHA0B13002g
	gi:50549601:ref:XP_502271.1	748258	749711	592	54.83	75.17	n/a	Yarrowia lipolytica hypothetical protein
	UM01656.1	748264	749774	570	53.33	76.32	n/a	ustilago_maydis hypothetical protein 571 aa
	SNU01182.1	748258	749897	552	82.28	88.95	n/a	Stagonospora nodorum hypothetical protein translation
	AO090001000061	747978	749816	537	61.31	93.85	n/a	Aspergillus oryzae predicted transporter major facilitator superfamily
blat_BES	QS0AAE117ZB10FM1	748197	748862	1231	n/a	n/a	n/a	n/a
blat_BES	QS0AAD69ZB05RM1	747853	748856	1403	n/a	n/a	n/a	n/a
blastx_SN15proteins	gnl:WGS:AAGI:SNOT_01182.2:gb:EAT90831	748258	749897	552	82.28	88.95	n/a	n/a
	gnl:WGS:AAGI:SNOT_01419.2:gb:EAT91068	747978	749759	756	49.40	66.14	n/a	n/a
	gnl:WGS:AAGI:SNOT_12519.2:gb:EAT80332	748294	749660	650	50.92	67.08	n/a	n/a
	gnl:WGS:AAGI:SNOT_12408.2:gb:EAT80221	747996	749705	496	41.69	90.93	n/a	n/a
	gnl:WGS:AAGI:SNOT_13373.2:gb:EAT79257	748261	749660	511	40.20	78.86	n/a	n/a
	gnl:WGS:AAGI:SNOT_07895.2:gb:EAT84171	747984	749711	540	43.91	88.15	n/a	n/a
	gnl:WGS:AAGI:SNOT_11031.2:gb:EAT81530	747981	749660	539	44.18	78.11	n/a	n/a
	gnl:WGS:AAGI:SNOT_04778.2:gb:EAT87169	748288	748836	524	47.28	35.11	n/a	n/a
	gnl:WGS:AAGI:SNOT_10711.2:gb:EAT82105	748288	749660	511	38.73	77.30	n/a	n/a
	gnl:WGS:AAGI:SNOT_04104.2:gb:EAT87864	748288	749672	537	29.60	74.86	n/a	n/a
	gnl:WGS:AAGI:SNOT_01419.2:gb:EAT91068	747978	749759	756	49.40	66.14	n/a	n/a
RepeatMasker_SR	no results
RepeatMasker_LC	no results
sim4_Lm_allest	no results
sim4_lm_allest6_clctg	no results
sim4_cDNA_BHowlett	no results
blastx_uniprot_sprot	P39932	747990	749900	569	38.10	95.96	n/a	Sugar transporter STL1 - Saccharomyces cerevisiae (Baker's yeast)
	Q12300	748288	749675	763	33.00	53.21	n/a	High-affinity glucose transporter RGT2 - Saccharomyces cerevisiae (Baker's yeast)
	P23585	748288	749681	541	32.60	75.42	n/a	High-affinity glucose transporter HXT2 - Saccharomyces cerevisiae (Baker's yeast)
	O59932	748288	749717	557	31.68	72.53	n/a	High-affinity hexose transporter ght4 - Schizosaccharomyces pombe (Fission yeast)
	P10870	748288	749717	884	31.85	45.81	n/a	High-affinity glucose transporter SNF3 - Saccharomyces cerevisiae (Baker's yeast)
	Q92339	748288	749717	555	29.71	74.59	n/a	High-affinity gluconate transporter ght3 - Schizosaccharomyces pombe (Fission yeast)
	Q92253	748288	749684	594	29.38	71.04	n/a	Probable glucose transporter rco-3 - Neurospora crassa
	P53387	748288	749209	566	33.22	51.06	n/a	Hexose transporter 2 - Kluyveromyces lactis (Yeast) (Candida sphaerica)
	P0AE24	748291	749206	472	30.80	55.72	n/a	Arabinose-proton symporter - Escherichia coli (strain K12)
	P0AE25	748291	749206	472	30.80	55.72	n/a	Arabinose-proton symporter - Escherichia coli O157:H7
REPET	no results
MUMer_show_coords_lm_WA74	no results