GRS - Genome Report System

Botrytis cinerea T4 GRS

Functional annotation

BofuT4_P047180.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	ssl:SS1G_04105	1	512	512	n/a	100.00	512	70.51	3.52	0.0	hypothetical protein K02257 protoheme IX farnesyltransferase [EC:2.5.1.-]
	bfu:BC1G_00294	74	512	439	n/a	100.00	439	76.77	0.00	0.0	hypothetical protein K02257 protoheme IX farnesyltransferase [EC:2.5.1.-]
	fgr:FG07547.1	165	474	310	Gaps:7	60.55	507	53.42	9.45	4e-85	hypothetical protein K02257 protoheme IX farnesyltransferase [EC:2.5.1.-]
	afv:AFLA_111320	20	476	457	Gaps:17	88.76	525	40.13	12.23	1e-84	heme a biosynthesis protein putative K02257 protoheme IX farnesyltransferase [EC:2.5.1.-]
	aor:AO090023000725	20	476	457	Gaps:17	88.76	525	39.91	12.45	5e-84	heme A farnesyltransferase K02257 protoheme IX farnesyltransferase [EC:2.5.1.-]
	ncr:NCU06141	210	474	265	Gaps:7	48.97	535	58.40	11.45	1e-83	hypothetical protein K02257 protoheme IX farnesyltransferase [EC:2.5.1.-]
	mgr:MGG_05944	33	476	444	Gaps:39	83.51	552	40.35	13.02	1e-82	MG05944.4 hypothetical protein K02257 protoheme IX farnesyltransferase [EC:2.5.1.-]
	pan:PODANSg2746	6	475	470	Gaps:56	96.28	484	43.56	10.52	3e-82	hypothetical protein K02257 protoheme IX farnesyltransferase [EC:2.5.1.-]
	pno:SNOG_00816	219	475	257	Gaps:6	89.64	280	60.56	10.36	7e-81	hypothetical protein K02257 protoheme IX farnesyltransferase [EC:2.5.1.-]
	ani:AN1722.2	96	476	381	Gaps:9	75.49	506	43.98	11.26	5e-80	hypothetical protein K02257 protoheme IX farnesyltransferase [EC:2.5.1.-]
blastp_uniprot_sprot	sp\|Q4I5G1\|COX10_GIBZE	165	474	310	Gaps:7	60.55	507	53.42	9.45	4e-86	Protoheme IX farnesyltransferase mitochondrial OS Gibberella zeae GN COX10 PE 3 SV 1
	sp\|Q7S5E7\|COX10_NEUCR	210	474	265	Gaps:7	48.97	535	58.40	11.45	1e-84	Protoheme IX farnesyltransferase mitochondrial OS Neurospora crassa GN cox-10 PE 3 SV 1
	sp\|P0C150\|COX10_MAGGR	33	476	444	Gaps:39	83.51	552	40.35	13.02	1e-83	Protoheme IX farnesyltransferase mitochondrial OS Magnaporthe grisea GN COX10 PE 3 SV 1
	sp\|Q5BCK8\|COX10_EMENI	96	476	381	Gaps:9	75.49	506	43.98	11.26	5e-81	Protoheme IX farnesyltransferase mitochondrial OS Emericella nidulans GN cox10 PE 3 SV 1
	sp\|Q4WP81\|COX10_ASPFU	58	476	419	Gaps:13	81.64	512	43.30	10.53	7e-78	Protoheme IX farnesyltransferase mitochondrial OS Aspergillus fumigatus GN cox10 PE 3 SV 1
	sp\|Q6C0L2\|COX10_YARLI	210	466	257	Gaps:32	53.29	471	47.81	11.55	8e-57	Protoheme IX farnesyltransferase mitochondrial OS Yarrowia lipolytica GN COX10 PE 3 SV 1
	sp\|Q6BKW6\|COX10_DEBHA	210	470	261	Gaps:39	55.41	462	48.44	10.55	8e-57	Protoheme IX farnesyltransferase mitochondrial OS Debaryomyces hansenii GN COX10 PE 3 SV 2
	sp\|Q6CTW6\|COX10_KLULA	210	467	258	Gaps:44	57.08	452	46.51	10.08	2e-52	Protoheme IX farnesyltransferase mitochondrial OS Kluyveromyces lactis GN COX10 PE 3 SV 1
	sp\|Q75F43\|COX10_ASHGO	210	471	262	Gaps:44	60.23	435	45.80	9.54	2e-50	Protoheme IX farnesyltransferase mitochondrial OS Ashbya gossypii GN COX10 PE 3 SV 1
	sp\|P21592\|COX10_YEAST	210	469	260	Gaps:44	56.28	462	43.46	10.77	1e-47	Protoheme IX farnesyltransferase mitochondrial OS Saccharomyces cerevisiae GN COX10 PE 2 SV 1
blastp_pdb	no results
rpsblast_cdd	gnl\|CDD\|162379	156	461	306	Gaps:34	99.29	280	38.13	16.55	1e-68	TIGR01473 cyoE_ctaB protoheme IX farnesyltransferase. This model describes protoheme IX farnesyltransferase also called heme O synthase an enzyme that creates an intermediate in the biosynthesis of heme A. Prior to the description of its enzymatic function this protein was often called a cytochrome o ubiquinol oxidase assembly factor.
	gnl\|CDD\|166417	159	508	350	Gaps:53	95.89	341	37.92	14.98	2e-64	PLN02776 PLN02776 prenyltransferase.
	gnl\|CDD\|30458	157	469	313	Gaps:34	93.09	304	35.34	15.90	2e-59	COG0109 CyoE Polyprenyltransferase (cytochrome oxidase assembly factor) [Posttranslational modification protein turnover chaperones].
	gnl\|CDD\|167808	141	461	321	Gaps:44	96.04	303	34.02	16.84	5e-52	PRK04375 PRK04375 protoheme IX farnesyltransferase Provisional.
	gnl\|CDD\|172007	142	451	310	Gaps:48	90.85	306	28.78	16.19	2e-33	PRK13362 PRK13362 protoheme IX farnesyltransferase Provisional.
	gnl\|CDD\|144580	181	451	271	Gaps:25	97.67	258	25.40	13.49	8e-24	pfam01040 UbiA UbiA prenyltransferase family.
	gnl\|CDD\|171784	157	376	220	Gaps:32	68.10	279	32.11	13.16	8e-19	PRK12869 ubiA protoheme IX farnesyltransferase Reviewed.
	gnl\|CDD\|30731	178	319	142	Gaps:2	48.44	289	29.29	12.14	1e-12	COG0382 UbiA 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases [Coenzyme metabolism].
	gnl\|CDD\|162380	176	325	150	Gaps:3	52.84	282	31.54	14.77	6e-10	TIGR01475 ubiA_other putative 4-hydroxybenzoate polyprenyltransferase. A fairly deep split separates this polyprenyltransferase subfamily from the set of mitochondrial and proteobacterial 4-hydroxybenzoate polyprenyltransferases described in TIGR01474. Protoheme IX farnesyltransferase (heme O synthase) (TIGR01473) is more distantly related. Because no species appears to have both this protein and a member of TIGR01474 it is likely that This model represents 4-hydroxybenzoate polyprenyltransferase a critical enzyme of ubiquinone biosynthesis in the Archaea Gram-positive bacteria Aquifex aeolicus the Chlamydias etc.
	gnl\|CDD\|130539	196	316	121	Gaps:6	42.35	281	32.77	16.81	3e-09	TIGR01474 ubiA_proteo 4-hydroxybenzoate polyprenyl transferase proteobacterial. A fairly deep split by both clustering (UPGMA) and phylogenetics (NJ tree) separates this group (mostly Proteobacterial and mitochondrial) with several characterized members from another group (mostly archaeal and Gram-positive bacterial) lacking characterized members.
rpsblast_kog	gnl\|CDD\|36594	150	464	315	Gaps:33	68.95	409	52.84	17.02	7e-89	KOG1380 KOG1380 KOG1380 Heme A farnesyltransferase [Coenzyme transport and metabolism].
rpsblast_kog	gnl\|CDD\|36595	187	320	134	Gaps:5	38.24	353	30.37	17.04	3e-07	KOG1381 KOG1381 KOG1381 Para-hydroxybenzoate-polyprenyl transferase [Coenzyme transport and metabolism].

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
RepeatMasker_ALL_Repbase	no results
TRF	no results
REPET	no results
sim4_Bot_allest	YCKA_550449	724332	725003	672	100.00	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_578415	724047	724713	667	100.00	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_571379	724047	724706	660	100.00	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCKA_559543	724332	724970	639	99.84	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCKA_558584	724422	725033	612	99.84	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCKA_555588	724332	724912	581	100.00	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCKA_564046	724332	724887	556	100.00	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCKA_559159	724332	724872	541	100.00	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCKA_550366	724332	724870	539	100.00	100.00	n/a	Botrytis cinerea HortResearch libraries
	PD0ACA25YM23FM1	724001	724703	703	99.86	100.00	n/a	BT4 mycelium - pH stress library
sim4_Bot_allest4_clctg	PD0ACA25YM23FM1	724001	724703	703	99.86	100.00	n/a	BT4 mycelium - pH stress library
sim4_Ss_allest	no results
blastx_uniprot_sprot	Q7S5E7	724405	725505	535	63.66	68.41	n/a	Protoheme IX farnesyltransferase mitochondrial precursor - Neurospora crassa
	Q4I5G1	724348	725517	507	61.38	77.12	n/a	Protoheme IX farnesyltransferase mitochondrial precursor - Gibberella zeae (Fusarium graminearum)
	P0C150	724411	725499	552	59.89	65.94	n/a	Protoheme IX farnesyltransferase mitochondrial precursor - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea)
	Q4WP81	724198	725547	512	52.78	87.70	n/a	Protoheme IX farnesyltransferase mitochondrial precursor - Aspergillus fumigatus (Sartorya fumigata)
	Q5BCK8	724315	725535	506	53.92	80.63	n/a	Protoheme IX farnesyltransferase mitochondrial precursor - Emericella nidulans (Aspergillus nidulans)
	Q6C0L2	724495	725424	471	55.48	62.00	n/a	Protoheme IX farnesyltransferase mitochondrial precursor - Yarrowia lipolytica (Candida lipolytica)
	Q6BKW6	724420	725466	462	50.15	71.65	n/a	Protoheme IX farnesyltransferase mitochondrial precursor - Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
	Q6CTW6	724339	725424	452	50.29	75.22	n/a	Protoheme IX farnesyltransferase mitochondrial precursor - Kluyveromyces lactis (Yeast) (Candida sphaerica)
	Q75F43	724480	725439	435	51.62	70.80	n/a	Protoheme IX farnesyltransferase mitochondrial precursor - Ashbya gossypii (Yeast) (Eremothecium gossypii)
	P21592	724474	725433	462	50.97	66.67	n/a	Protoheme IX farnesyltransferase mitochondrial precursor - Saccharomyces cerevisiae (Baker's yeast)
blastx_uniprot_trembl	Q2GQA6	724348	725508	471	60.71	84.29	n/a	Putative uncharacterized protein - Chaetomium globosum (Soil fungus)
	A1CHE7	724027	725526	519	49.71	98.07	n/a	Heme a biosynthesis protein putative - Aspergillus clavatus
	Q2UGS9	724084	725562	525	48.30	95.43	n/a	Heme A farnesyltransferase - Aspergillus oryzae
	A1CXD8	724198	725547	518	52.31	87.84	n/a	Heme a biosynthesis protein putative - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) (Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
	Q0CLS2	724186	725553	521	51.97	87.52	n/a	Putative uncharacterized protein - Aspergillus terreus (strain NIH 2624)
	A2QID3	724186	725547	524	51.42	87.60	n/a	Function: Cox10 is required for the synthesis of cytochrome oxidase in yeast - Aspergillus niger
	Q0V598	724681	725505	280	68.66	95.71	n/a	Putative uncharacterized protein - Phaeosphaeria nodorum (Septoria nodorum)
	Q59Z02	724414	725472	461	48.22	73.32	n/a	Putative uncharacterized protein COX10 - Candida albicans (Yeast)
	A1CHE7	724027	725526	519	49.71	98.07	n/a	Heme a biosynthesis protein putative - Aspergillus clavatus
blastx_FNG30_prot	SS1G_04105.1	724027	725562	512	89.65	100.00	n/a	sclerotinia_sclerotiorum hypothetical protein translation 513 aa
	SNU00816.1	724315	725505	471	64.54	83.23	n/a	Stagonospora nodorum hypothetical protein translation
	CHG09848.1	724348	725508	471	60.71	84.29	n/a	Chaetomium globosum hypothetical protein translation 472 aa
	NCU06141.2	724405	725505	535	63.66	68.41	n/a	Neurospora crassa hypothetical protein translation 536 aa
	FG07547.1	724348	725517	507	61.38	77.12	n/a	fusarium_graminearum hypothetical protein 508 aa
	jgi:Triree:19347	724474	725424	314	69.11	100.00	n/a	Trichoderma reesei
	MGG_05944.5	724411	725499	552	59.89	65.94	n/a	magnaporthe_grisea hypothetical protein translation 553 aa
	gi:70994374:ref:XP_751991.1:	724198	725547	512	52.78	87.70	n/a	Aspergillus fumigatus Af293 heme a biosynthesis protein
	AO090023000725	724084	725562	525	48.30	95.43	n/a	Aspergillus oryzae heme A farnesyltransferase
	AN1722	724315	725535	506	53.92	80.63	n/a	Aspergillus nidulans AN1722.3 conserved hypothetical protein translation 507 aa
	SS1G_04105.1	724027	725562	512	89.65	100.00	n/a	sclerotinia_sclerotiorum hypothetical protein translation 513 aa
sim4_B0510_genes	BC1G_00294.1	724246	725565	1320	100.00	100.00	n/a	n/a
sim4_SS_genes	SS1G_04105.1	724027	725508	1539	85.16	96.30	n/a	n/a
sim4_SS_genes	SS1G_04105.1	724027	725508	1539	85.16	96.30	n/a	n/a
blastn_b0510_supercontig	B0510_supercontig_1.1	720802	726884	1306028	100.00	n/a	n/a	n/a
blastn_SS_supercontig	SS_supercontig_1.5	724334	725532	2230026	85.24	n/a	n/a	n/a
blastn_SS_supercontig	SS_supercontig_1.5	723890	724253	2230026	84.89	n/a	n/a	n/a
blat_oligo	botrytisP00072396	724234	724293	60	n/a	n/a	n/a	array_gene:BofuT4_P047180_1 . max_over_threshold:48.08 . min_over_threshold:12.61 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00072397	724319	724378	60	n/a	n/a	n/a	array_gene:BofuT4_P047180_1 . max_over_threshold:96.46 . min_over_threshold:18.14 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00072398	724426	724485	60	n/a	n/a	n/a	array_gene:BofuT4_P047180_1 . max_over_threshold:124.63 . min_over_threshold:33.94 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00072399	724993	725052	60	n/a	n/a	n/a	array_gene:BofuT4_P047180_1 . max_over_threshold:50.73 . min_over_threshold:5.58 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00072400	725145	725204	60	n/a	n/a	n/a	array_gene:BofuT4_P047180_1 . max_over_threshold:47.25 . min_over_threshold:3.93 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00072401	725163	725222	60	n/a	n/a	n/a	array_gene:BofuT4_P047180_1 . max_over_threshold:28.31 . min_over_threshold:3.74 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00072402	725171	725230	60	n/a	n/a	n/a	array_gene:BofuT4_P047180_1 . max_over_threshold:25.25 . min_over_threshold:3.31 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00072403	725175	725234	60	n/a	n/a	n/a	array_gene:BofuT4_P047180_1 . max_over_threshold:23.21 . min_over_threshold:2.96 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00072404	725274	725333	60	n/a	n/a	n/a	array_gene:BofuT4_P047180_1 . max_over_threshold:24.3 . min_over_threshold:1.84 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0

Current manual annotation

Ortholog