GRS - Genome Report System

Botrytis cinerea T4 GRS

Functional annotation

BofuT4_P041560.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_01469	1	939	939	n/a	100.00	939	97.87	0.00	0.0	hypothetical protein
	ssl:SS1G_06050	26	939	914	n/a	100.00	914	92.34	2.95	0.0	hypothetical protein
	fgr:FG07422.1	6	939	934	Gaps:69	99.78	925	62.19	13.65	0.0	hypothetical protein
	pan:PODANSg8410	12	939	928	Gaps:67	98.52	943	62.11	13.02	0.0	hypothetical protein
	ncr:NCU03658	1	939	939	Gaps:136	100.00	1059	55.81	13.22	0.0	similar to Sls2
	mgr:MGG_07486	1	939	939	Gaps:82	100.00	943	60.87	14.53	0.0	MG07486.4 hypothetical protein
	pno:SNOG_03454	2	939	938	Gaps:45	99.56	901	58.42	14.94	0.0	hypothetical protein
	tml:GSTUM_00009566001	39	938	900	Gaps:51	98.97	872	58.86	15.64	0.0	hypothetical protein
	cim:CIMG_09974	14	939	926	Gaps:68	78.52	1108	55.06	15.98	0.0	hypothetical protein
	pcs:Pc22g22220	32	939	908	Gaps:71	99.19	868	54.24	16.14	0.0	Pc22g22220
blastp_uniprot_sprot	sp\|O74854\|POF6_SCHPO	184	939	756	Gaps:35	84.06	872	32.88	22.51	1e-111	F-box protein pof6 OS Schizosaccharomyces pombe GN pof6 PE 1 SV 1
	sp\|P39531\|RCY1_YEAST	248	939	692	Gaps:70	85.00	840	30.39	21.01	4e-74	Recyclin-1 OS Saccharomyces cerevisiae GN RCY1 PE 1 SV 4
	sp\|Q9XTM1\|EXOC5_DROME	587	924	338	Gaps:31	43.80	710	24.76	22.51	4e-11	Exocyst complex component 5 OS Drosophila melanogaster GN sec10 PE 1 SV 1
	sp\|O00471\|EXOC5_HUMAN	603	924	322	Gaps:28	41.53	708	21.09	26.19	1e-10	Exocyst complex component 5 OS Homo sapiens GN EXOC5 PE 1 SV 1
	sp\|P97878\|EXOC5_RAT	603	924	322	Gaps:28	41.53	708	21.09	25.85	2e-10	Exocyst complex component 5 OS Rattus norvegicus GN Exoc5 PE 1 SV 1
	sp\|Q3TPX4\|EXOC5_MOUSE	603	924	322	Gaps:28	41.53	708	20.75	26.19	7e-10	Exocyst complex component 5 OS Mus musculus GN Exoc5 PE 2 SV 1
blastp_pdb	no results
rpsblast_cdd	gnl\|CDD\|148800	205	929	725	Gaps:93	96.44	703	33.04	17.85	1e-153	pfam07393 Sec10 Exocyst complex component Sec10. This family contains the Sec10 component (approximately 650 residues long) of the eukaryotic exocyst complex which specifically affects the synthesis and delivery of secretory and basolateral plasma membrane proteins.
rpsblast_kog	gnl\|CDD\|38949	145	935	791	Gaps:107	89.65	763	26.32	20.61	5e-64	KOG3745 KOG3745 KOG3745 Exocyst subunit - Sec10p [Intracellular trafficking secretion and vesicular transport].

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
RepeatMasker_ALL_Repbase	no results
TRF	no results
REPET	no results
sim4_Bot_allest	YCOA_577890	321230	321895	666	99.85	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_568592	320569	321208	639	100.00	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCOA_576835	321230	321848	619	100.00	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCHA_543618	320288	320891	604	99.83	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCIA_546910	319655	320351	697	99.86	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCIA_537533	319653	320194	543	99.82	100.00	n/a	Botrytis cinerea HortResearch libraries
sim4_Bot_allest4_clctg	no results
sim4_Ss_allest	no results
blastx_uniprot_sprot	O74854	320263	322560	872	32.66	85.67	n/a	F-box protein pof6 - Schizosaccharomyces pombe (Fission yeast)
blastx_uniprot_sprot	P39531	320485	322548	840	29.70	84.17	n/a	Recyclin-1 - Saccharomyces cerevisiae (Baker's yeast)
blastx_uniprot_trembl	Q2GXU3	319756	322560	970	61.87	99.48	n/a	Putative uncharacterized protein - Chaetomium globosum (Soil fungus)
	A4R9Y6	319744	322560	943	61.51	100.00	n/a	Putative uncharacterized protein - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea)
	Q0UXR0	319741	322560	901	59.18	99.78	n/a	Putative uncharacterized protein - Phaeosphaeria nodorum (Septoria nodorum)
	Q9HE57	319771	322560	1059	61.67	90.65	n/a	Related to Sls2 protein - Neurospora crassa
	A1CS90	319744	322560	885	53.79	100.00	n/a	F-box domain protein - Aspergillus clavatus
	Q2URB8	319768	322560	889	53.47	98.88	n/a	Exocyst subunit - Sec10p - Aspergillus oryzae
	A2Q906	320224	322560	866	55.92	87.76	n/a	Contig An01c0210 complete genome - Aspergillus niger
	Q0CN47	320224	322560	886	55.79	85.78	n/a	Putative uncharacterized protein - Aspergillus terreus (strain NIH 2624)
	A4R9Y6	319744	322560	943	61.51	100.00	n/a	Putative uncharacterized protein - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea)
	Q0UXR0	319741	322560	901	59.18	99.78	n/a	Putative uncharacterized protein - Phaeosphaeria nodorum (Septoria nodorum)
	A1CS90	319744	322560	885	53.79	100.00	n/a	F-box domain protein - Aspergillus clavatus
blastx_FNG30_prot	SS1G_06050.1	319819	322560	914	93.98	100.00	n/a	sclerotinia_sclerotiorum hypothetical protein translation 915 aa
	FG07422.1	319759	322560	925	62.73	99.78	n/a	fusarium_graminearum hypothetical protein 926 aa
	CHG07211.1	319756	322560	970	61.87	99.48	n/a	Chaetomium globosum hypothetical protein translation 971 aa
	MGG_07486.5	319744	322560	943	61.51	100.00	n/a	magnaporthe_grisea hypothetical protein translation 944 aa
	jgi:Triree:31673	319753	322560	920	60.94	99.89	n/a	Trichoderma reesei
	NCU03658.2	319771	322560	1059	61.67	90.65	n/a	Neurospora crassa hypothetical protein AL451013 related to Sls2 protein [Neurospora crassa] translation 1060 aa
	AO090005000891	319768	322560	889	53.47	98.88	n/a	Aspergillus oryzae exocyst subunit - Sec10p
	gi:70990212:ref:XP_749955.1:	320224	322560	847	54.86	89.96	n/a	Aspergillus fumigatus Af293 hypothetical protein Afu1g02050
	AN10061	320224	322560	880	54.94	86.25	n/a	Aspergillus nidulans AN10061.3 conserved hypothetical protein translation 881 aa
	CIMG_09974.2	320320	322560	1108	56.93	66.43	n/a	Coccidioides immitis hypothetical protein translation 1109 aa
	MGG_07486.5	319744	322560	943	61.51	100.00	n/a	magnaporthe_grisea hypothetical protein translation 944 aa
sim4_B0510_genes	BC1G_01469.1	319744	322563	2820	99.96	100.00	n/a	n/a
sim4_SS_genes	SS1G_06050.1	319819	322563	2745	87.30	96.39	n/a	n/a
blastn_b0510_supercontig	B0510_supercontig_1.4	317648	325761	810338	99.99	n/a	n/a	n/a
blastn_SS_supercontig	SS_supercontig_1.7	320245	322564	1946943	86.47	n/a	n/a	n/a
	SS_supercontig_1.7	319744	320196	1946943	87.86	n/a	n/a	n/a
	SS_supercontig_1.7	319744	320196	1946943	87.86	n/a	n/a	n/a
	SS_supercontig_1.7	320245	322564	1946943	86.47	n/a	n/a	n/a
blat_oligo	botrytisP00068231	321094	321153	60	n/a	n/a	n/a	array_gene:BofuT4_P041560_1 . max_over_threshold:12.27 . min_over_threshold:1.56 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00068232	321236	321295	60	n/a	n/a	n/a	array_gene:BofuT4_P041560_1 . max_over_threshold:14.82 . min_over_threshold:1.79 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00068233	321304	321363	60	n/a	n/a	n/a	array_gene:BofuT4_P041560_1 . max_over_threshold:31.23 . min_over_threshold:3.58 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00068234	321371	321430	60	n/a	n/a	n/a	array_gene:BofuT4_P041560_1 . max_over_threshold:27.43 . min_over_threshold:3.14 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00068236	321565	321624	60	n/a	n/a	n/a	array_gene:BofuT4_P041560_1 . max_over_threshold:29.21 . min_over_threshold:3.07 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00068237	321664	321723	60	n/a	n/a	n/a	array_gene:BofuT4_P041560_1 . max_over_threshold:38.86 . min_over_threshold:4.51 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00068238	321762	321821	60	n/a	n/a	n/a	array_gene:BofuT4_P041560_1 . max_over_threshold:36.72 . min_over_threshold:5.07 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00068239	322027	322086	60	n/a	n/a	n/a	array_gene:BofuT4_P041560_1 . max_over_threshold:114.42 . min_over_threshold:21.11 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:1
	botrytisP00068240	322298	322357	60	n/a	n/a	n/a	array_gene:BofuT4_P041560_1 . max_over_threshold:21.47 . min_over_threshold:2.4 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0

Current manual annotation

Ortholog