GRS - Genome Report System

Botrytis cinerea T4 GRS

Functional annotation

BofuT4_P004120.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_02916	47	720	674	n/a	96.98	695	98.66	0.00	0.0	hypothetical protein K02209 minichromosome maintenance protein 5 (cell division control protein 46)
	fgr:FG06777.1	1	720	720	Gaps:3	100.00	721	77.81	9.29	0.0	hypothetical protein K02209 minichromosome maintenance protein 5 (cell division control protein 46)
	ncr:NCU01171	1	720	720	Gaps:6	100.00	724	76.80	10.36	0.0	DNA replication licensing factor mcm5 K02209 minichromosome maintenance protein 5 (cell division control protein 46)
	ure:UREG_03958	1	719	719	Gaps:2	99.86	718	75.59	12.27	0.0	DNA replication licensing factor mcm5 K02209 minichromosome maintenance protein 5 (cell division control protein 46)
	afm:AFUA_5G02520	1	719	719	Gaps:8	99.86	718	75.87	11.58	0.0	DNA replication licensing factor Mcm5 K02209 minichromosome maintenance protein 5 (cell division control protein 46)
	nfi:NFIA_039560	1	719	719	Gaps:8	99.86	718	75.87	11.30	0.0	DNA replication licensing factor Mcm5 putative K02209 minichromosome maintenance protein 5 (cell division control protein 46)
	pan:PODANSg9004	1	720	720	Gaps:7	100.00	721	76.01	11.23	0.0	hypothetical protein K02209 minichromosome maintenance protein 5 (cell division control protein 46)
	ang:An02g10260	1	719	719	Gaps:6	99.86	720	75.10	12.38	0.0	hypothetical protein K02209 minichromosome maintenance protein 5 (cell division control protein 46)
	act:ACLA_002640	1	717	717	Gaps:7	99.58	719	75.84	11.45	0.0	DNA replication licensing factor Mcm5 putative K02209 minichromosome maintenance protein 5 (cell division control protein 46)
	cim:CIMG_06459	1	719	719	Gaps:2	99.86	718	74.48	11.58	0.0	hypothetical protein K02209 minichromosome maintenance protein 5 (cell division control protein 46)
blastp_uniprot_sprot	sp\|P41389\|MCM5_SCHPO	1	719	719	Gaps:16	99.03	720	62.41	15.15	0.0	DNA replication licensing factor mcm5 OS Schizosaccharomyces pombe GN mcm5 PE 1 SV 2
	sp\|P29496\|MCM5_YEAST	1	719	719	Gaps:55	99.61	775	58.03	15.03	0.0	Minichromosome maintenance protein 5 OS Saccharomyces cerevisiae GN MCM5 PE 1 SV 1
	sp\|P55862\|MCM5A_XENLA	18	717	700	Gaps:18	96.60	735	48.73	19.30	0.0	DNA replication licensing factor mcm5-A OS Xenopus laevis GN mcm5-a PE 1 SV 2
	sp\|Q561P5\|MCM5_XENTR	14	717	704	Gaps:18	97.14	735	48.60	19.19	0.0	DNA replication licensing factor mcm5 OS Xenopus tropicalis GN mcm5 PE 2 SV 1
	sp\|Q6PCI7\|MCM5B_XENLA	14	717	704	Gaps:18	97.14	735	48.04	19.61	0.0	DNA replication licensing factor mcm5-B OS Xenopus laevis GN mcm5-b PE 2 SV 1
	sp\|Q0V8B7\|MCM5_BOVIN	17	717	701	Gaps:21	97.55	734	48.60	18.30	0.0	DNA replication licensing factor MCM5 OS Bos taurus GN MCM5 PE 2 SV 1
	sp\|P33992\|MCM5_HUMAN	23	717	695	Gaps:16	96.05	734	48.65	18.87	0.0	DNA replication licensing factor MCM5 OS Homo sapiens GN MCM5 PE 1 SV 5
	sp\|P49718\|MCM5_MOUSE	14	717	704	Gaps:15	97.27	733	48.11	18.65	0.0	DNA replication licensing factor MCM5 OS Mus musculus GN Mcm5 PE 2 SV 1
	sp\|Q54CP4\|MCM5_DICDI	20	717	698	Gaps:52	96.17	757	46.70	18.54	0.0	DNA replication licensing factor mcm5 OS Dictyostelium discoideum GN mcm5 PE 3 SV 1
	sp\|Q21902\|MCM5_CAEEL	25	717	693	Gaps:35	95.39	759	44.61	18.92	1e-171	DNA replication licensing factor mcm-5 OS Caenorhabditis elegans GN mcm-5 PE 2 SV 1
blastp_pdb	3f9v_A	32	636	605	Gaps:36	98.32	595	38.97	21.20	1e-102	mol:protein length:595 Minichromosome maintenance protein MCM
	3f8t_A	317	637	321	Gaps:42	57.11	506	32.87	20.76	2e-21	mol:protein length:506 Predicted ATPase involved in replication cont
	2vl6_C	32	270	239	Gaps:15	87.31	268	26.50	22.22	1e-12	mol:protein length:268 MINICHROMOSOME MAINTENANCE PROTEIN MCM
	2vl6_B	32	270	239	Gaps:15	87.31	268	26.50	22.22	1e-12	mol:protein length:268 MINICHROMOSOME MAINTENANCE PROTEIN MCM
	2vl6_A	32	270	239	Gaps:15	87.31	268	26.50	22.22	1e-12	mol:protein length:268 MINICHROMOSOME MAINTENANCE PROTEIN MCM
	1ltl_F	61	267	207	Gaps:18	67.74	279	25.93	22.22	4e-08	mol:protein length:279 DNA replication initiator (Cdc21/Cdc54)
	1ltl_E	61	267	207	Gaps:18	67.74	279	25.93	22.22	4e-08	mol:protein length:279 DNA replication initiator (Cdc21/Cdc54)
	1ltl_D	61	267	207	Gaps:18	67.74	279	25.93	22.22	4e-08	mol:protein length:279 DNA replication initiator (Cdc21/Cdc54)
	1ltl_C	61	267	207	Gaps:18	67.74	279	25.93	22.22	4e-08	mol:protein length:279 DNA replication initiator (Cdc21/Cdc54)
	1ltl_B	61	267	207	Gaps:18	67.74	279	25.93	22.22	4e-08	mol:protein length:279 DNA replication initiator (Cdc21/Cdc54)
rpsblast_cdd	gnl\|CDD\|128644	124	637	514	Gaps:21	99.61	509	51.08	14.79	0.0	smart00350 MCM minichromosome maintenance proteins.
	gnl\|CDD\|31434	30	712	683	Gaps:31	98.83	682	41.84	16.32	1e-169	COG1241 MCM2 Predicted ATPase involved in replication control Cdc46/Mcm family [DNA replication recombination and repair].
	gnl\|CDD\|144183	305	637	333	Gaps:6	100.00	327	59.94	16.21	1e-156	pfam00493 MCM MCM2/3/5 family.
	gnl\|CDD\|173403	15	652	638	Gaps:131	80.55	915	26.73	19.67	1e-79	PTZ00111 PTZ00111 DNA replication licensing factor MCM4 Provisional.
	gnl\|CDD\|31058	305	669	365	Gaps:52	99.39	329	21.10	18.65	1e-07	COG0714 COG0714 MoxR-like ATPases [General function prediction only].
rpsblast_kog	gnl\|CDD\|35702	2	719	718	Gaps:14	99.59	729	55.79	16.80	0.0	KOG0481 KOG0481 KOG0481 DNA replication licensing factor MCM5 component [Replication recombination and repair].
	gnl\|CDD\|35701	20	670	651	Gaps:55	86.91	764	34.49	17.47	1e-118	KOG0480 KOG0480 KOG0480 DNA replication licensing factor MCM6 component [Replication recombination and repair].
	gnl\|CDD\|35703	27	697	671	Gaps:70	95.28	721	35.37	17.47	1e-117	KOG0482 KOG0482 KOG0482 DNA replication licensing factor MCM7 component [Replication recombination and repair].
	gnl\|CDD\|35700	17	631	615	Gaps:80	78.12	818	36.31	17.68	1e-114	KOG0479 KOG0479 KOG0479 DNA replication licensing factor MCM3 component [Replication recombination and repair].
	gnl\|CDD\|35699	25	711	687	Gaps:55	83.08	804	34.28	17.96	1e-114	KOG0478 KOG0478 KOG0478 DNA replication licensing factor MCM4 component [Replication recombination and repair].
	gnl\|CDD\|35698	14	655	642	Gaps:38	74.00	854	35.60	19.15	1e-113	KOG0477 KOG0477 KOG0477 DNA replication licensing factor MCM2 component [Replication recombination and repair].

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
RepeatMasker_ALL_Repbase	no results
TRF	no results
REPET	no results
sim4_Bot_allest	YCIA_542480	346671	347309	639	100.00	100.00	n/a	Botrytis cinerea HortResearch libraries
	BcA1_3487_B02	345500	346307	747	100.00	100.00	n/a	BC A1 mycelium
	BcA1_3490_K08	314795	359871	789	98.73	100.00	n/a	BC A1 mycelium
sim4_Bot_allest4_clctg	BcA1_3487_B02	345500	346307	747	100.00	100.00	n/a	BC A1 mycelium 4 days in rich media library
sim4_Ss_allest	no results
blastx_uniprot_sprot	P41389	345406	347622	720	63.49	96.25	n/a	DNA replication licensing factor mcm5 - Schizosaccharomyces pombe (Fission yeast)
	P29496	345406	347296	775	63.86	82.84	n/a	Minichromosome maintenance protein 5 - Saccharomyces cerevisiae (Baker's yeast)
	Q561P5	345412	347559	735	50.88	93.06	n/a	DNA replication licensing factor mcm5 - Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
	P55862	345412	347559	735	50.73	93.06	n/a	DNA replication licensing factor mcm5-A - Xenopus laevis (African clawed frog)
	Q6PCI7	345412	347559	735	50.29	93.06	n/a	DNA replication licensing factor mcm5-B - Xenopus laevis (African clawed frog)
	P33992	345412	347368	734	51.18	86.78	n/a	DNA replication licensing factor MCM5 - Homo sapiens (Human)
	Q0V8B7	345412	347368	734	51.10	86.92	n/a	DNA replication licensing factor MCM5 - Bos taurus (Bovine)
	P49718	345412	347389	733	50.62	87.86	n/a	DNA replication licensing factor MCM5 - Mus musculus (Mouse)
	Q21902	345412	347356	759	48.96	82.08	n/a	DNA replication licensing factor mcm-5 - Caenorhabditis elegans
	Q9UXG1	345634	347254	686	42.91	73.03	n/a	Minichromosome maintenance protein MCM - Sulfolobus solfataricus
blastx_uniprot_trembl	Q4WEC5	345406	347723	718	77.13	99.86	n/a	DNA replication licensing factor Mcm5 putative - Aspergillus fumigatus (Sartorya fumigata)
	A1C585	345412	347723	719	77.09	99.58	n/a	DNA replication licensing factor Mcm5 putative - Aspergillus clavatus
	A4QSC7	345403	347655	720	74.51	99.72	n/a	Putative uncharacterized protein - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea)
	A5AAD2	345406	347541	720	78.22	93.75	n/a	Remark: Fission yeast genes nda1 and nda4 - Aspergillus niger
	Q2GWB8	345403	347359	718	81.14	87.88	n/a	Putative uncharacterized protein - Chaetomium globosum (Soil fungus)
	Q8X0Y2	345403	347359	724	80.41	87.43	n/a	Probable cell division control protein nda4 - Neurospora crassa
	A6QSR1	345406	347359	718	79.65	87.60	n/a	DNA replication licensing factor mcm5 - Ajellomyces capsulata (strain NAm1) (Histoplasma capsulatum)
	Q1DTA4	345406	347359	718	78.22	87.60	n/a	Putative uncharacterized protein - Coccidioides immitis
blastx_FNG30_prot	SS1G_07673.1	345403	347056	531	99.06	100.00	n/a	sclerotinia_sclerotiorum hypothetical protein translation 532 aa
	CHG07736.1	345403	347723	718	79.25	100.00	n/a	Chaetomium globosum conserved hypothetical protein translation 719 aa
	gi:70985168:ref:XP_748090.1:	345406	347723	718	77.13	99.86	n/a	Aspergillus fumigatus Af293 DNA replication licensing factor Mcm5
	AO090102000366	345406	347723	719	75.77	99.86	n/a	Aspergillus oryzae DNA replication licensing factor MCM5 component
	CIMG_06459.2	345406	347723	718	75.73	99.86	n/a	Coccidioides immitis hypothetical protein translation 719 aa
	AN7994	345421	347723	724	76.40	98.34	n/a	Aspergillus nidulans AN7994.3 conserved hypothetical protein translation 725 aa
	MGG_08646.5	345403	347655	720	74.51	99.72	n/a	magnaporthe_grisea hypothetical protein translation 721 aa
	NCU01171.2	345403	347359	716	80.41	88.41	n/a	Neurospora crassa conserved hypothetical protein translation 717 aa
	FG06777.1	345403	347359	721	80.25	87.79	n/a	fusarium_graminearum conserved hypothetical protein 722 aa
	jgi:Triree:30355	345403	347359	721	79.62	87.79	n/a	Trichoderma reesei
sim4_B0510_genes	BC1G_13345.1	346241	346310	4335	87.14	1.61	n/a	n/a
sim4_B0510_genes	BC1G_02916.1	345400	347929	2088	100.00	100.00	n/a	n/a
sim4_SS_genes	SS1G_07673.1	345400	347056	1596	86.59	100.00	n/a	n/a
sim4_SS_genes	SS1G_07673.1	345400	347056	1596	86.59	100.00	n/a	n/a
blastn_b0510_supercontig	B0510_supercontig_1.121	346241	346330	125340	85.56	n/a	n/a	n/a
blastn_b0510_supercontig	B0510_supercontig_1.11	345250	355616	480285	99.98	n/a	n/a	n/a
blastn_SS_supercontig	SS_supercontig_1.10	345946	347332	1547569	88.46	n/a	n/a	n/a
	SS_supercontig_1.10	345397	345914	1547569	83.40	n/a	n/a	n/a
	SS_supercontig_1.10	345397	345914	1547569	83.40	n/a	n/a	n/a
blat_oligo	botrytisP00039755	346857	346916	60	n/a	n/a	n/a	array_gene:BofuT4_P004120_1 . max_over_threshold:13.61 . min_over_threshold:0.96 . percent_hyb_over_threshold:96.42 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00039756	346729	346788	60	n/a	n/a	n/a	array_gene:BofuT4_P004120_1 . max_over_threshold:19.63 . min_over_threshold:1.4 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00039757	346619	346678	60	n/a	n/a	n/a	array_gene:BofuT4_P004120_1 . max_over_threshold:33.61 . min_over_threshold:2 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00039758	346380	346439	60	n/a	n/a	n/a	array_gene:BofuT4_P004120_1 . max_over_threshold:33.42 . min_over_threshold:1.96 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00039759	346212	346271	60	n/a	n/a	n/a	array_gene:BofuT4_P004120_1 . max_over_threshold:34.07 . min_over_threshold:2.51 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00039760	345868	345988	60	n/a	n/a	n/a	array_gene:BofuT4_P004120_1 . max_over_threshold:82.31 . min_over_threshold:10.42 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00039762	345512	345571	60	n/a	n/a	n/a	array_gene:BofuT4_P004120_1 . max_over_threshold:13.14 . min_over_threshold:1.1 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00039763	345481	345540	60	n/a	n/a	n/a	array_gene:BofuT4_P004120_1 . max_over_threshold:7.94 . min_over_threshold:0.84 . percent_hyb_over_threshold:96.42 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00039764	345401	345460	60	n/a	n/a	n/a	array_gene:BofuT4_P004120_1 . max_over_threshold:27.82 . min_over_threshold:1.44 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0

Current manual annotation

Ortholog