GRS - Genome Report System

Botrytis cinerea B0510 GRS

Functional annotation

BC1G_10929.1

Gene Identifier

Domain/Motif (Interproscan results)

Localization / Targeting

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_10929	1	1542	1542	n/a	100.00	1542	96.17	0.00	0.0	hypothetical protein
	ssl:SS1G_06184	1	1542	1542	Gaps:1	100.00	1331	90.46	3.23	0.0	hypothetical protein
	cim:CIMG_06852	1	1542	1542	Gaps:44	98.18	1370	52.57	18.36	0.0	hypothetical protein
	nfi:NFIA_005600	1	1542	1542	Gaps:88	99.77	1315	55.87	18.14	0.0	ABC multidrug transporter SitT
	afm:AFUA_3G03430	1	1542	1542	Gaps:86	99.70	1315	56.06	18.31	0.0	ABC multidrug transporter SitT (EC:3.6.3.-) K01552 [EC:3.6.3.-]
	nfi:NFIA_012860	1	1542	1542	Gaps:47	96.93	1369	51.47	18.76	0.0	multidrug resistance protein 1 2 3 (p glycoprotein 1 2 3)
	afv:AFLA_010630	1	1542	1542	Gaps:99	99.70	1327	54.57	18.29	0.0	ABC multidrug transporter SidT
	aor:AO090103000166	1	1542	1542	Gaps:99	99.70	1327	54.50	18.22	0.0	multidrug/pheromone exporter ABC superfamily
	act:ACLA_060990	1	1542	1542	Gaps:118	99.62	1314	55.46	17.88	0.0	ABC multidrug transporter SitT
	ani:AN6237.2	1	1542	1542	Gaps:99	94.92	1377	55.55	17.83	0.0	hypothetical protein
blastp_uniprot_sprot	sp\|P36619\|PMD1_SCHPO	1	1533	1533	Gaps:195	95.67	1362	41.98	19.49	0.0	Leptomycin B resistance protein pmd1 OS Schizosaccharomyces pombe GN pmd1 PE 2 SV 2
	sp\|P21447\|MDR3_MOUSE	4	1540	1537	Gaps:100	96.08	1276	35.97	19.90	0.0	Multidrug resistance protein 3 OS Mus musculus GN Abcb1a PE 1 SV 3
	sp\|P06795\|MDR1_MOUSE	6	1533	1528	Gaps:159	96.08	1276	41.44	21.37	0.0	Multidrug resistance protein 1 OS Mus musculus GN Abcb1 PE 1 SV 1
	sp\|P08183\|MDR1_HUMAN	4	1541	1538	Gaps:123	96.02	1280	41.99	20.50	0.0	Multidrug resistance protein 1 OS Homo sapiens GN ABCB1 PE 1 SV 3
	sp\|P21449\|MDR2_CRIGR	1	1541	1541	Gaps:190	96.00	1276	47.18	23.10	0.0	Multidrug resistance protein 2 OS Cricetulus griseus GN PGY2 PE 2 SV 2
	sp\|P21448\|MDR1_CRIGR	1	1540	1540	Gaps:108	96.16	1276	35.78	19.32	0.0	Multidrug resistance protein 1 OS Cricetulus griseus GN ABCB1 PE 1 SV 2
	sp\|P43245\|MDR1_RAT	38	1533	1496	Gaps:169	96.16	1277	41.37	20.52	0.0	Multidrug resistance protein 1 OS Rattus norvegicus GN Abcb1 PE 2 SV 1
	sp\|P21439\|MDR3_HUMAN	38	1541	1504	Gaps:127	95.72	1286	41.02	20.06	1e-179	Multidrug resistance protein 3 OS Homo sapiens GN ABCB4 PE 1 SV 2
	sp\|Q9FWX7\|AB11B_ARATH	13	1531	1519	Gaps:175	96.71	1278	48.22	21.84	1e-178	ABC transporter B family member 11 OS Arabidopsis thaliana GN ABCB11 PE 2 SV 1
	sp\|P21440\|MDR2_MOUSE	38	1533	1496	Gaps:163	96.47	1276	39.64	20.31	1e-176	Multidrug resistance protein 2 OS Mus musculus GN Abcb4 PE 2 SV 1
blastp_pdb	3g5u_B	4	1540	1537	Gaps:100	95.48	1284	36.13	19.98	0.0	mol:protein length:1284 Multidrug resistance protein 1a
	3g5u_A	4	1540	1537	Gaps:100	95.48	1284	36.13	19.98	0.0	mol:protein length:1284 Multidrug resistance protein 1a
	3g61_B	4	1540	1537	Gaps:100	95.48	1284	36.05	19.98	0.0	mol:protein length:1284 Multidrug resistance protein 1a
	3g61_A	4	1540	1537	Gaps:100	95.48	1284	36.05	19.98	0.0	mol:protein length:1284 Multidrug resistance protein 1a
	3g60_B	4	1540	1537	Gaps:100	95.48	1284	36.05	19.98	0.0	mol:protein length:1284 Multidrug resistance protein 1a
	3g60_A	4	1540	1537	Gaps:100	95.48	1284	36.05	19.98	0.0	mol:protein length:1284 Multidrug resistance protein 1a
	3b60_D	40	1533	1494	Gaps:143	95.36	582	42.34	25.77	2e-55	mol:protein length:582 Lipid A export ATP-binding/permease protein m
	3b60_C	40	1533	1494	Gaps:143	95.36	582	42.34	25.77	2e-55	mol:protein length:582 Lipid A export ATP-binding/permease protein m
	3b60_B	40	1533	1494	Gaps:143	95.36	582	42.34	25.77	2e-55	mol:protein length:582 Lipid A export ATP-binding/permease protein m
	3b60_A	40	1533	1494	Gaps:143	95.36	582	42.34	25.77	2e-55	mol:protein length:582 Lipid A export ATP-binding/permease protein m
rpsblast_cdd	gnl\|CDD\|173501	4	1528	1525	Gaps:378	99.25	1466	36.56	21.79	1e-111	PTZ00265 PTZ00265 multidrug resistance protein (mdr1) Provisional.
	gnl\|CDD\|31327	1	1542	1542	Gaps:103	98.24	567	46.68	22.62	1e-87	COG1132 MdlB ABC-type multidrug transport system ATPase and permease components [Defense mechanisms].
	gnl\|CDD\|73008	42	1540	1499	Gaps:46	100.00	238	72.27	12.61	6e-86	cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane the other three being MDL1(ABC7) MDL2 and ATM1. In fact the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another..
	gnl\|CDD\|32455	38	1541	1504	Gaps:110	82.51	709	43.42	21.20	3e-84	COG2274 SunT ABC-type bacteriocin/lantibiotic exporters contain an N-terminal double-glycine peptidase domain [Defense mechanisms].
	gnl\|CDD\|131259	38	1540	1503	Gaps:89	93.75	576	47.96	18.15	2e-82	TIGR02204 MsbA_rel ABC transporter permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
	gnl\|CDD\|162132	40	1535	1496	Gaps:132	86.64	711	43.83	19.16	5e-80	TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
	gnl\|CDD\|131258	4	1533	1530	Gaps:167	99.47	571	47.71	20.25	3e-72	TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family MsbA which exports lipid A. It may also act in multidrug resistance. Lipid A a part of lipopolysaccharide is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
	gnl\|CDD\|162558	38	1533	1496	Gaps:105	73.78	694	45.51	20.51	8e-71	TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus but rather carry signals located toward the extreme C-terminus to direct type I secretion.
	gnl\|CDD\|73012	42	1535	1494	Gaps:52	100.00	236	63.14	14.41	6e-68	cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown its disruption results in the accumulation of excess mitochondrial iron loss of mitochondrial cytochromes oxidative damage to mitochondrial DNA and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds like sugars ions peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif Q-loop and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins..
	gnl\|CDD\|73010	42	1534	1493	Gaps:49	99.57	234	63.52	15.02	3e-67	cd03251 ABCC_MsbA MsbA is an essential ABC transporter closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds like sugars ions peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif Q-loop and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins..
rpsblast_kog	gnl\|CDD\|35278	1	1542	1542	Gaps:174	99.35	1228	53.28	20.25	0.0	KOG0055 KOG0055 KOG0055 Multidrug/pheromone exporter ABC superfamily [Secondary metabolites biosynthesis transport and catabolism].
	gnl\|CDD\|35281	36	1531	1496	Gaps:98	85.61	716	47.63	18.76	1e-97	KOG0058 KOG0058 KOG0058 Peptide exporter ABC superfamily [Intracellular trafficking secretion and vesicular transport].
	gnl\|CDD\|35277	40	1538	1499	Gaps:314	84.36	1381	35.62	22.49	1e-83	KOG0054 KOG0054 KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein ABC superfamily [Secondary metabolites biosynthesis transport and catabolism].
	gnl\|CDD\|35280	39	1534	1496	Gaps:124	98.82	591	42.12	21.58	4e-67	KOG0057 KOG0057 KOG0057 Mitochondrial Fe/S cluster exporter ABC superfamily [Intracellular trafficking secretion and vesicular transport].
	gnl\|CDD\|35279	35	1531	1497	Gaps:91	63.80	790	36.71	18.25	3e-60	KOG0056 KOG0056 KOG0056 Heavy metal exporter HMT1 ABC superfamily [Inorganic ion transport and metabolism].
	gnl\|CDD\|35282	1003	1494	492	Gaps:59	51.86	885	22.00	14.81	5e-21	KOG0059 KOG0059 KOG0059 Lipid exporter ABCA1 and related proteins ABC superfamily [Lipid transport and metabolism General function prediction only].
	gnl\|CDD\|35284	586	1527	942	Gaps:105	81.40	613	27.25	17.64	4e-16	KOG0061 KOG0061 KOG0061 Transporter ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis transport and catabolism].
	gnl\|CDD\|35283	591	1515	925	Gaps:128	69.04	659	24.40	20.88	5e-16	KOG0060 KOG0060 KOG0060 Long-chain acyl-CoA transporter ABC superfamily (involved in peroxisome organization and biogenesis) [Lipid transport and metabolism General function prediction only].
	gnl\|CDD\|35288	587	1498	912	Gaps:95	32.78	1391	34.65	21.93	2e-13	KOG0065 KOG0065 KOG0065 Pleiotropic drug resistance proteins (PDR1-15) ABC superfamily [Secondary metabolites biosynthesis transport and catabolism].
	gnl\|CDD\|36145	590	1538	949	Gaps:133	82.90	614	29.47	18.47	9e-12	KOG0927 KOG0927 KOG0927 Predicted transporter (ABC superfamily) [General function prediction only].

Other analysis

Functional Gbrowse

Ortholog

Analysis	Species	Link
bdbh (Bi-Directional Best Hit)	Botrytis cinerea T4	BofuT4_P150060.1
bdbh (Bi-Directional Best Hit)	Sclerotinia sclerotiorum	SS1G_06184.1
First Blast Hit	Botrytis cinerea T4	BofuT4_P150060.1
First Blast Hit	Sclerotinia sclerotiorum	SS1G_06184.1
orthomcl	Aspergillus niger	An03g03620
	Aspergillus niger	An04g08340
	Aspergillus niger	An08g05450
	Aspergillus niger	An12g03150
	Aspergillus niger	An17g01770
	Botrytis cinerea B0510	BC1G_00181.1
	Botrytis cinerea B0510	BC1G_02708.1
	Botrytis cinerea B0510	BC1G_03509.1
	Botrytis cinerea B0510	BC1G_05589.1
	Botrytis cinerea B0510	BC1G_10130.1
	Botrytis cinerea B0510	BC1G_10568.1
	Botrytis cinerea B0510	BC1G_15198.1
	Botrytis cinerea T4	BofuT4_P048380.1
	Botrytis cinerea T4	BofuT4_P107660.1
	Botrytis cinerea T4	BofuT4_P118990.1
	Botrytis cinerea T4	BofuT4_P120000.1
	Botrytis cinerea T4	BofuT4_P129120.1
	Botrytis cinerea T4	BofuT4_P150060.1
	Botrytis cinerea T4	BofuT4_P162480.1
	Gibberella zeae	FGSG_00541
	Gibberella zeae	FGSG_02786
	Gibberella zeae	FGSG_03323
	Gibberella zeae	FGSG_04336
	Gibberella zeae	FGSG_06771
	Gibberella zeae	FGSG_06881
	Gibberella zeae	FGSG_08823
	Gibberella zeae	FGSG_11988
	Gibberella zeae	FGSG_12704
	Magnaporthe oryzae	MGG_00141T0
	Magnaporthe oryzae	MGG_00239T0
	Magnaporthe oryzae	MGG_02348T0
	Magnaporthe oryzae	MGG_05595T0
	Magnaporthe oryzae	MGG_08970T0
	Magnaporthe oryzae	MGG_09931T0
	Magnaporthe oryzae	MGG_13762T0
	Magnaporthe oryzae	MGG_14400T0
	Magnaporthe oryzae	MGG_14778T0
	Magnaporthe oryzae	MGG_14824T0
	Magnaporthe oryzae	MGG_15334T0
	Neurospora crassa	NCU06011T0
	Neurospora crassa	NCU07546T0
	Neurospora crassa	NCU08439T0
	Neurospora crassa	NCU09975T0
	Pyrenophora teres	PTTT_07927.1
	Pyrenophora teres	PTTT_08345.1
	Pyrenophora teres	PTTT_08484.1
	Pyrenophora teres	PTTT_08742.1
	Pyrenophora teres	PTTT_11779.1
	Pyrenophora teres	PTTT_13121.1
	Pyrenophora teres	PTTT_13393.1
	Pyrenophora teres	PTTT_13462.1
	Pyrenophora teres	PTTT_17961.1
	Phaeosphaeria nodorum	SNOG_02135.3
	Phaeosphaeria nodorum	SNOG_05636.3
	Phaeosphaeria nodorum	SNOG_05968.3
	Phaeosphaeria nodorum	SNOG_06002.3
	Phaeosphaeria nodorum	SNOG_14365.3
	Phaeosphaeria nodorum	SNOG_15094.3
	Sclerotinia sclerotiorum	SS1G_02000.1
	Sclerotinia sclerotiorum	SS1G_04252.1
	Sclerotinia sclerotiorum	SS1G_04756.1
	Sclerotinia sclerotiorum	SS1G_06184.1
	Sclerotinia sclerotiorum	SS1G_07287.1
	Sclerotinia sclerotiorum	SS1G_13852.1