GRS - Genome Report System

Botrytis cinerea T4 GRS

Functional annotation

BofuT4P8000007001

Sequence

Domain/Motif (Interproscan results)

Localization / Targeting

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	bfu:BC1G_07954	13	257	245	n/a	98.79	248	74.69	0.00	2e-98	hypothetical protein K04082 molecular chaperone HscB
	ssl:SS1G_01431	11	257	247	Gaps:1	100.00	246	64.63	5.69	1e-85	hypothetical protein K04082 molecular chaperone HscB
	fgr:FG01028.1	80	257	178	Gaps:3	67.05	261	52.00	10.29	2e-42	hypothetical protein K04082 molecular chaperone HscB
	pno:SNOG_04121	75	234	160	Gaps:3	28.86	544	45.22	14.01	3e-30	hypothetical protein K01489 cytidine deaminase [EC:3.5.4.5]
	aor:AO090023000319	5	257	253	Gaps:16	96.69	272	34.22	11.79	3e-29	mitochondrial J-type chaperone K04082 molecular chaperone HscB
	cpw:CPC735_038640	74	257	184	Gaps:6	78.33	240	41.49	12.77	5e-29	DnaJ domain containing protein K04082 molecular chaperone HscB
	afv:AFLA_107350	5	257	253	Gaps:16	96.69	272	34.22	11.41	5e-29	DnaJ domain protein K04082 molecular chaperone HscB
	ani:AN1469.2	70	250	181	Gaps:9	68.10	279	39.47	10.53	1e-28	hypothetical protein K04082 molecular chaperone HscB
	cim:CIMG_02196	80	257	178	Gaps:4	57.32	314	41.67	13.33	1e-28	hypothetical protein K04082 molecular chaperone HscB
	ure:UREG_01521	67	248	182	Gaps:5	18.21	1016	40.54	12.43	7e-28	hypothetical protein
blastp_uniprot_sprot	sp\|Q9UTL6\|JAC1_SCHPO	92	245	154	Gaps:3	67.11	225	30.46	17.88	8e-14	J-type co-chaperone jac1 mitochondrial OS Schizosaccharomyces pombe GN jac1 PE 2 SV 1
	sp\|P53193\|JAC1_YEAST	79	257	179	Gaps:9	93.48	184	29.65	16.28	9e-14	J-type co-chaperone JAC1 mitochondrial OS Saccharomyces cerevisiae GN JAC1 PE 1 SV 1
	sp\|Q8K3A0\|HSC20_MOUSE	98	244	147	Gaps:7	62.39	234	28.77	16.44	4e-11	Iron-sulfur cluster co-chaperone protein HscB mitochondrial OS Mus musculus GN Hscb PE 2 SV 2
	sp\|Q13WZ0\|HSCB_BURXL	73	161	89	Gaps:11	48.00	175	44.05	17.86	7e-08	Co-chaperone protein hscB homolog OS Burkholderia xenovorans (strain LB400) GN hscB PE 3 SV 1
	sp\|B2T5L9\|HSCB_BURPP	73	161	89	Gaps:11	48.00	175	44.05	17.86	7e-08	Co-chaperone protein hscB homolog OS Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN hscB PE 3 SV 1
	sp\|B2JIY6\|HSCB_BURP8	73	161	89	Gaps:11	48.00	175	44.05	15.48	1e-07	Co-chaperone protein hscB homolog OS Burkholderia phymatum (strain DSM 17167 / STM815) GN hscB PE 3 SV 1
	sp\|Q8Y0M0\|HSCB_RALSO	75	161	87	Gaps:11	46.59	176	46.34	13.41	2e-07	Co-chaperone protein hscB homolog OS Ralstonia solanacearum GN hscB PE 3 SV 1
	sp\|A9MHJ7\|HSCB_SALAR	82	161	80	Gaps:8	45.61	171	44.87	15.38	4e-07	Co-chaperone protein hscB OS Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN hscB PE 3 SV 1
	sp\|B4EZU5\|HSCB_PROMH	82	161	80	Gaps:8	45.09	173	41.03	21.79	5e-07	Co-chaperone protein hscB OS Proteus mirabilis (strain HI4320) GN hscB PE 3 SV 1
	sp\|B4EDS4\|HSCB_BURCJ	75	161	87	Gaps:15	46.86	175	45.12	15.85	8e-07	Co-chaperone protein hscB homolog OS Burkholderia cepacia (strain J2315 / LMG 16656) GN hscB PE 3 SV 1
blastp_pdb	3bvo_B	98	244	147	Gaps:7	70.53	207	28.08	14.38	1e-09	mol:protein length:207 Co-chaperone protein HscB mitochondrial prec
	3bvo_A	98	244	147	Gaps:7	70.53	207	28.08	14.38	1e-09	mol:protein length:207 Co-chaperone protein HscB mitochondrial prec
	3hho_D	75	162	88	Gaps:11	47.70	174	40.96	21.69	1e-07	mol:protein length:174 Co-chaperone protein hscB homolog
	3hho_C	75	162	88	Gaps:11	47.70	174	40.96	21.69	1e-07	mol:protein length:174 Co-chaperone protein hscB homolog
	3hho_B	75	162	88	Gaps:11	47.70	174	40.96	21.69	1e-07	mol:protein length:174 Co-chaperone protein hscB homolog
	3hho_A	75	162	88	Gaps:11	47.70	174	40.96	21.69	1e-07	mol:protein length:174 Co-chaperone protein hscB homolog
	1fpo_C	82	161	80	Gaps:8	45.61	171	42.31	17.95	7e-07	mol:protein length:171 CHAPERONE PROTEIN HSCB
	1fpo_B	82	161	80	Gaps:8	45.61	171	42.31	17.95	7e-07	mol:protein length:171 CHAPERONE PROTEIN HSCB
	1fpo_A	82	161	80	Gaps:8	45.61	171	42.31	17.95	7e-07	mol:protein length:171 CHAPERONE PROTEIN HSCB
rpsblast_cdd	gnl\|CDD\|129797	98	251	154	Gaps:10	99.36	157	30.13	20.51	2e-24	TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20 related to the DnaK-DnaJ heat shock proteins which also serve as molecular chaperones. Hsc20 unlike DnaJ appears not to have chaperone activity on its own but to act solely as a regulatory subunit for Hsc66 (i.e. to be a co-chaperone). The gene for Hsc20 in E. coli hscB is not induced by heat shock.
	gnl\|CDD\|179598	74	233	160	Gaps:22	87.50	176	37.66	12.99	1e-17	PRK03578 hscB co-chaperone HscB Provisional.
	gnl\|CDD\|149034	174	246	73	Gaps:2	97.40	77	36.00	18.67	2e-14	pfam07743 HSCB_C HSCB C-terminal oligomerisation domain. This domain is the HSCB C-terminal oligomerisation domain and is found on co-chaperone proteins.
	gnl\|CDD\|179914	80	198	119	Gaps:19	64.33	171	40.91	19.09	1e-13	PRK05014 hscB co-chaperone HscB Provisional.
	gnl\|CDD\|167217	98	244	147	Gaps:16	87.35	166	27.59	24.83	1e-12	PRK01356 hscB co-chaperone HscB Provisional.
	gnl\|CDD\|31274	96	249	154	Gaps:10	90.80	174	30.38	18.99	2e-11	COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification protein turnover chaperones].
	gnl\|CDD\|166894	80	230	151	Gaps:17	80.92	173	37.86	20.00	3e-11	PRK00294 hscB co-chaperone HscB Provisional.
	gnl\|CDD\|179335	98	236	139	Gaps:13	82.08	173	32.39	20.42	5e-11	PRK01773 hscB co-chaperone HscB Provisional.
rpsblast_kog	gnl\|CDD\|38402	75	245	171	Gaps:18	95.83	168	34.16	18.63	5e-22	KOG3192 KOG3192 KOG3192 Mitochondrial J-type chaperone [Posttranslational modification protein turnover chaperones].

Other analysis

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
RepeatMasker_ALL_Repbase	no results
TRF	no results
REPET	no results
sim4_Bot_allest	YCMA_566885	278235	278781	547	98.72	100.00	n/a	Botrytis cinerea HortResearch libraries
	YCMA_566392	278235	278688	454	98.24	100.00	n/a	Botrytis cinerea HortResearch libraries
	PD0ABA17YO05FM1	278221	278914	694	99.71	100.00	n/a	BT4 young mycelium library
	PD0ADA7YC17CM1	278759	279384	626	99.84	100.00	n/a	B0510 mycelium - carbon sources library
sim4_Bot_allest4_clctg	CL_bt4_SupSuperContig_8_105_1_bt4ctg_1688_012.Contig1_v5	278221	279384	1164	99.74	100.00	n/a	all_lib_clone_nr:2
sim4_Ss_allest	G781P590RH7.T0	278452	278908	524	85.04	72.71	n/a	Ss ESTs grown as developing sclerotia
	G787P532RA6.T0	278300	278905	658	85.68	70.06	n/a	Ss ESTs grown as developing apothecia
	G787P577RG5.T0	255510	286006	802	84.34	74.06	n/a	Ss ESTs grown as developing apothecia
blastx_uniprot_sprot	no results
blastx_uniprot_trembl	Q53IN9	278388	279002	240	60.40	84.17	n/a	Putative chaperone - Gibberella fujikuroi (Bakanae and foot rot disease fungus) (Fusarium moniliforme)
	Q7S0P9	278340	279002	309	44.86	78.64	n/a	Putative uncharacterized protein - Neurospora crassa
	Q0UVU3	278454	278933	544	61.15	28.86	n/a	Putative uncharacterized protein - Phaeosphaeria nodorum (Septoria nodorum)
	Q1E5G7	278364	279002	314	47.47	69.11	n/a	Putative uncharacterized protein - Coccidioides immitis
	Q2UHT5	278244	279002	272	41.44	96.69	n/a	Mitochondrial J-type chaperone - Aspergillus oryzae
	A6QZC8	278361	279002	279	47.51	79.21	n/a	Putative uncharacterized protein - Ajellomyces capsulata (strain NAm1) (Histoplasma capsulatum)
	Q5BDB1	278310	278981	279	42.37	84.59	n/a	Putative uncharacterized protein - Emericella nidulans (Aspergillus nidulans)
	Q4WCF5	278214	279002	270	39.25	98.15	n/a	DnaJ domain protein - Aspergillus fumigatus (Sartorya fumigata)
blastx_FNG30_prot	SS1G_01431.1	278262	279002	246	84.15	100.00	n/a	sclerotinia_sclerotiorum hypothetical protein translation 247 aa
	FG01028.1	278238	279002	261	54.30	98.08	n/a	fusarium_graminearum hypothetical protein 262 aa
	jgi:Triree:14111	278466	279002	186	58.60	100.00	n/a	Trichoderma reesei
	SNU04120.1	278229	278933	237	51.56	94.94	n/a	Stagonospora nodorum hypothetical protein translation
	NCU07360.2	278340	279002	309	44.86	78.64	n/a	Neurospora crassa hypothetical protein translation 310 aa
	CIMG_02196.2	278364	279002	314	47.47	69.11	n/a	Coccidioides immitis hypothetical protein translation 315 aa
	AO090023000319	278244	279002	272	41.44	96.69	n/a	Aspergillus oryzae mitochondrial J-type chaperone
	AN1469	278310	278981	279	42.37	84.59	n/a	Aspergillus nidulans AN1469.3 conserved hypothetical protein translation 280 aa
	gi:50549521:ref:XP_502231.1	278472	278984	203	42.47	91.63	n/a	Yarrowia lipolytica hypothetical protein
	SNU04120.1	278229	278933	237	51.56	94.94	n/a	Stagonospora nodorum hypothetical protein translation
	gi:70983480:ref:XP_747267.1:	278214	279002	270	39.25	98.15	n/a	Aspergillus fumigatus Af293 hypothetical protein Afu8g04610
sim4_B0510_genes	no results
sim4_SS_genes	SS1G_01431.1	278300	279005	741	86.61	75.57	n/a	n/a
blastn_b0510_supercontig	B0510_supercontig_1.43	276950	280139	262799	99.81	n/a	n/a	n/a
blastn_SS_supercontig	SS_supercontig_1.2	278463	279007	2719746	84.04	n/a	n/a	n/a
blastn_SS_supercontig	SS_supercontig_1.2	278463	279007	2719746	84.04	n/a	n/a	n/a
blat_oligo	botrytisP00130194	278248	278307	60	n/a	n/a	n/a	array_gene:BofuT4_P122170_1 . max_over_threshold:27.09 . min_over_threshold:0.72 . percent_hyb_over_threshold:92.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00130195	278255	278314	60	n/a	n/a	n/a	array_gene:BofuT4_P122170_1 . max_over_threshold:24.25 . min_over_threshold:0.79 . percent_hyb_over_threshold:92.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00130196	278262	278321	60	n/a	n/a	n/a	array_gene:BofuT4_P122170_1 . max_over_threshold:29.85 . min_over_threshold:0.77 . percent_hyb_over_threshold:92.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00130197	278267	278326	60	n/a	n/a	n/a	array_gene:BofuT4_P122170_1 . max_over_threshold:26 . min_over_threshold:0.9 . percent_hyb_over_threshold:92.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00130198	278273	278332	60	n/a	n/a	n/a	array_gene:BofuT4_P122170_1 . max_over_threshold:34.29 . min_over_threshold:0.81 . percent_hyb_over_threshold:92.85 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00130199	278366	278425	60	n/a	n/a	n/a	array_gene:BofuT4_P122170_1 . max_over_threshold:39.94 . min_over_threshold:0.92 . percent_hyb_over_threshold:96.42 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00130200	278527	278586	60	n/a	n/a	n/a	array_gene:BofuT4_P122170_1 . max_over_threshold:9.41 . min_over_threshold:0.62 . percent_hyb_over_threshold:85.71 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0
	botrytisP00130201	278568	278627	60	n/a	n/a	n/a	array_gene:BofuT4_P122170_1 . max_over_threshold:65.35 . min_over_threshold:3.55 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:1
	botrytisP00130203	278909	278968	60	n/a	n/a	n/a	array_gene:BofuT4_P122170_1 . max_over_threshold:111.46 . min_over_threshold:28.86 . percent_hyb_over_threshold:100 . flag_cross_hyb_gene:0 . flag_cross_hyb_organism:0

Analysis

Type

Start

End

Ortholog

Current manual annotation

Functional edition

Gene ID:

Gene Name:

Synonym:

PMID:

Functional validation status

Not validate Validate

Evidence Code :

Gene function:

Comments:

Gene Ontology:

Search ontology by term or ID (for this enter only number) :

Gene prediction at gene locus

TreeView