Study : 5S-IGS high-throughput sequencing of oaks

Identification

• Name: 5S-IGS high-throughput sequencing of oaks
• Identifier: dXJuOkVWQS9zdHVkeS9QUkpOQTYxMTA1Nw==
• Data link: Link to this study on EBI European Nucleotide Archive
• Description: We generated High-Throughput Sequencing (HTS) amplicon data of the intergenic spacer of the 5S nuclear ribosomal DNA cistron (5S-IGS) in oaks, using six mock samples that differ in geographic origin, species composition, and pool complexity. The potential of the marker for automated geno-taxonomy applications was assessed using a reference dataset of 1770 5S-IGS cloned sequences covering the entire taxonomic breadth and distribution range of western Eurasian Quercus, and applying similarity (BLAST) and evolutionary approaches (ML trees and EPA).
• Data files: SRR11306994; SRR11306993; SRR11306992; SRR11306991; SRR11306990; SRR11306989