Study : Transcriptomic changes in Arabidopsis thaliana upon the expression of mutated TFIIS

Identification

• Name: Transcriptomic changes in Arabidopsis thaliana upon the expression of mutated TFIIS
• Identifier: dXJuOkVWQS9zdHVkeS9QUkpOQTUyOTg5OA==
• Data link: Link to this study on EBI European Nucleotide Archive
• Description: The expresion of dominant negative version of Arabidopsis TFIIS (TFIISmut) in plants lacking funtional TFIIS leads to severe growth defects. The genome-wide analysis of transcriptomic changes upon TFIISmut expression was performed by RNA-seq to better understand the biological importance of TFIIS. 10DAS seedlings of transgenic lines carring inducible GFP-TFIIS or GFP-TFIISmut transgenes were studied by RNA-seq following plants exposure to 24h b-estradiol or EtOH (mock) induction. Overall design: Arabidopsis mRNA profiles of 10-day old transgenic plants with inducible expression of GFP-TFIIS or GFP-TFIISmut fusion proteins in tfIIs-1 background were generated by deep sequencing and analysed comparatively with uninduced plants.
• Data files: SRR8816113; SRR8816114; SRR8816115; SRR8816116; SRR8816109; SRR8816110; SRR8816111; SRR8816112; SRR8816105; SRR8816106; SRR8816107; SRR8816108; SRR8816101; SRR8816102; SRR8816103; SRR8816104; SRR8816097; SRR8816098; SRR8816099; SRR8816100; ERZ1377091; ERZ1377109; ERZ1377113; ERZ1377122; ERZ1377094; ERZ1377102; ERZ1377114; ERZ1377124; ERZ1377092; ERZ1377104; ERZ1377125; ERZ1377127; ERZ1377096; ERZ1377101; ERZ1377111; ERZ1377129; ERZ1377084; ERZ1377105; ERZ1377106; ERZ1377107