Study : Genome-wide analysis of transcription and PIF7 DNA binding in response to long days with daily oscillating temperatures in Arabidopsis thaliana

Identification

• Name: Genome-wide analysis of transcription and PIF7 DNA binding in response to long days with daily oscillating temperatures in Arabidopsis thaliana
• Identifier: dXJuOkVWQS9zdHVkeS9QUkpOQTUxMDUzNQ==
• Data link: Link to this study on EBI European Nucleotide Archive
• Description: This study aimed to characterise the genome-wide PIF7-mediated responses of Arabidopsis thaliana seedlings to long photoperiods with a warm 27°C midday in comparison to long photoperiods at constant 17°C. Transcriptomic responses were observed in Col-0 wild-type and pif7-1 loss-of-function mutants investigate the potential contribution of the transcription factor PIF7 to the warm temperature response under the described conditions. In parallel, ChIP-seq of a PIF7-MYC-expressing line under the same conditions was employed to investigate global DNA binding changes of PIF7 in response to a change in temperature. Overall design: Please refer to individual samples
• Data files: SRR8335146; SRR8335145; SRR8335144; SRR8335143; SRR8335142; SRR8335141; SRR8335140; SRR8335139; SRR8335138; SRR8335137; SRR8335136; SRR8335135; SRR8335134; SRR8335133; SRR8335132; SRR8335131; SRR8335130; SRR8335129; SRR8335128; SRR8335127; ERZ1465219; ERZ1465235; ERZ1465327; ERZ1465230; ERZ1465217; ERZ1465221; ERZ1465337; ERZ1465222; ERZ1465233; ERZ1465338; ERZ1465229; ERZ1465344; ERZ1465224; ERZ1725465; ERZ1465348; ERZ1465333; ERZ1465228; ERZ1465334; ERZ1465226; ERZ1465232