Study : Genotyping by sequencing GBS of 73 Turkish landrace and modern cultivated accessions of Cicer arietinum (chickpea)

Identification

Name
Genotyping by sequencing GBS of 73 Turkish landrace and modern cultivated accessions of Cicer arietinum (chickpea)
Identifier
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Source
Description
<![CDATA[Due to its high nutritional value, chickpea is one of the most important and cost-effective legumes for human diet. Nutrient elements, such as Cu, P, K have numerous essential functions for the human metabolism. In thisstudy, association mapping of the seed Cu, P and K concentrations were performed on a population consisting of 107 Cicer reticulatum and 73 Cicer arietinum individuals in four environments (two locations x two years).A total of 121,840 SNPs were genotyped across 180 individuals by GBS analysis. The association mapping between the SNP markers and the seed Cu, P, K concentrations were identified and eight SNPs were found tobe significantly associated with three nutrient elements in more than two environments This research suggests that association mapping is a useful methodology for the identification of genes controlling the Cu, P and Kuptake in chickpea seeds for further association mapping, molecular breeding, and marker-assisted selection and plant breeding studies and provides a broader understanding of the relationship between the investigated

Genotype

Accession number Name Taxon
TR34851 Cicer arietinum TKBT242
TR37029 Cicer arietinum TKBT230
TR37097 Cicer arietinum TKBT229
TR40243 Cicer arietinum TKBT245
TR40264 Cicer arietinum TKBT244
TR42244 Cicer arietinum TKBT226
TR42274 Cicer arietinum TKBT204
TR42362 Cicer arietinum TKBT210
TR45022 Cicer arietinum TKBT180
TR47630 Cicer arietinum TKBT220
TR47632 Cicer arietinum TKBT214
TR49666 Cicer arietinum TKBT212
TR53828 Cicer arietinum TKBT184
TR54956 Cicer arietinum TKBT162
TR65706 Cicer arietinum TKBT179
TR65914 Cicer arietinum TKBT176
TR67110 Cicer arietinum TKBT159
TR73134 Cicer arietinum TKBT155
TR77365 Cicer arietinum TKBT224
TR79396 Cicer arietinum TKBT232