Study : Cucurbita maxima cultivar:2013-12 and 9-6 Raw sequence reads

Identification

• Name: Cucurbita maxima cultivar:2013-12 and 9-6 Raw sequence reads
• Identifier: dXJuOkVWQS9zdHVkeS9QUkpOQTU0OTc4Ng==
• Data link: Link to this study on EBI European Nucleotide Archive
• Description: A high-density genetic map can provide a basis for quantitative trait locus (QTL) mapping and marker-assisted selection (MAS) based on single-nucleotide polymorphisms (SNPs). Specific length amplified fragment sequencing (SLAF-seq) has been successfully applied to construct high-density maps of many species but not Cucurbita maxima. In this study, 100 F2 populations from two morphologically diverse parents were used to successfully construct a high-density genetic map of C. maxima using the SLAF-seq method. A total of 8,406 SNPs were used to construct a 3,376.87 cM genetic map for 20 linkage groups (LGs) with an average genetic distance of 0.47 cM.
• Data files: SRR9614540; SRR9614539; SRR9614542; SRR9614541; SRR9614544; SRR9614543; SRR9614598; SRR9614597; SRR9614590; SRR9614589; SRR9614588; SRR9614587; SRR9614594; SRR9614593; SRR9614592; SRR9614591; SRR9614596; SRR9614595; SRR9614569; SRR9614570