Study : Formaldehyde-crosslinking and immunoprecipitation (FA-CLIP) sequencing to identify ECT2 targets in Arabidopsis

Identification

• Name: Formaldehyde-crosslinking and immunoprecipitation (FA-CLIP) sequencing to identify ECT2 targets in Arabidopsis
• Identifier: dXJuOkVWQS9zdHVkeS9QUkpOQTQyMjQ5MQ==
• Data link: Link to this study on EBI European Nucleotide Archive
• Description: Developed an efficient method to identify RNA binding sites for RNA-binding proteins in plants. Overall design: Formaldehyde-crosslinking enhance the binding affinity of RNA-binding protein of RNA, while RNaseT1 digestion can improve the resolution of targets site. We combined the two methods to generate FA-CLIP method in plant to identify RNA-binding protein targets.
• Data files: SRR6377842; SRR6377841; SRR6377849; SRR6377850; SRR6377847; SRR6377848; SRR6377845; SRR6377846; SRR6377843; SRR6377844