Study : RNA-seq of rice root colonised and non-colonised by nitrogen fixing bacterium Herbaspirillum seropedicae
Identification
Name
RNA-seq of rice root colonised and non-colonised by nitrogen fixing bacterium Herbaspirillum seropedicae
Identifier
dXJuOkVWQS9zdHVkeS9QUkpOQTQ4OTI3Mw==
Source
Description
Herbaspirillum spp. colonise rice and other plants and stimulate plant growth and productivity. However the molecular factors involved are largely unknown. To further explore this interaction, an RNA-seq transcriptional analysis of Nipponbare rice roots after 3 days of inoculation with Herbaspirillum seropedicae SmR1 was carried out in two independent samples (biological replicates) of each treatment (non-inoculated and inoculated). Yielding a total of 4 sequencing libraries, which were designated IR3a and IR3b libraries (inoculated roots) and CR3a and CR3b (non-inoculated roots).
Data files
Genotype
| Accession number | Name | Taxon |
|---|