Study : Mapping of ribosome footprints from Arabidopsis thaliana (thale cress)

Identification

• Name: Mapping of ribosome footprints from Arabidopsis thaliana (thale cress)
• Identifier: dXJuOkVWQS9zdHVkeS9QUkpOQTMyODA3Mw==
• Data link: Link to this study on EBI European Nucleotide Archive
• Description: Translation elongation in Arabidopsis thaliana was studied using ribosome profiling. 3 biological replicates of young, immature leaves of Arabidopsis thaliana, Col-0, grown in short day conditions for 7 weeks were harvested. Ribosomal footprints were produced by digestion with MNase, the ribosomes were purified by centrifugation through a sucrose cushion and the RNA was isolated from the ribosome fraction. The 16-42 nt fraction was sequenced using Illumina’s HiSeq 4000.
• Data files: SRR3749602; SRR3749603; SRR3749604