Study : Whole genome-wide transcript profiling to identify differentially expressed genes associated with seed field emergence in two soybean low phytate mutants

Identification

• Name: Whole genome-wide transcript profiling to identify differentially expressed genes associated with seed field emergence in two soybean low phytate mutants
• Identifier: dXJuOkVWQS9zdHVkeS9QUkpOQTMyNTI5OA==
• Data link: Link to this study on EBI European Nucleotide Archive
• Description: Seed germination is important to soybean (Glycine max) growth and development, ultimately affecting soybean yield. A lower seed field emergence has been the main hindrance for breeding soybeans low in phytate. Although this reduction could be overcome by additional breeding and selection, the mechanisms of seed germination in different low phytate mutants remain unknown. In this study, we performed a comparative transcript analysis of two low phytate soybean mutants (TW-1 and TW-1-M), which have the same mutation, a 2 bp deletion in GmMIPS1, but show a significant difference in seed field emergence. Overall design: 18 samples were analyzed in this research, and three replicates were included.
• Data files: SRR3655484; SRR3655485; SRR3655486; SRR3655487; SRR3655488; SRR3655489; SRR3655490; SRR3655491; SRR3655492; SRR3655493; SRR3655494; SRR3655495; SRR3655478; SRR3655479; SRR3655480; SRR3655481; SRR3655482; SRR3655483; ERZ1120215; ERZ472832; ERZ538811; ERZ1120238; ERZ538822; ERZ1120207; ERZ471185; ERZ538813; ERZ1120252; ERZ538818; ERZ1120268; ERZ538812; ERZ1120239; ERZ538816; ERZ1120223; ERZ538807; ERZ1120271; ERZ538814; ERZ1120202; ERZ471182