Study : Gene expression profiling shows that combination of jazQ and phyB-9 mutations promotes additive and enhanced expression of growth- and defense-related genes

Identification

• Name: Gene expression profiling shows that combination of jazQ and phyB-9 mutations promotes additive and enhanced expression of growth- and defense-related genes
• Identifier: dXJuOkVWQS9zdHVkeS9QUkpOQTMxNDY5Mg==
• Data link: Link to this study on EBI European Nucleotide Archive
• Description: The quintuple jaz mutant jazQ and the phytochrome mutant phyB-9 affect plant growth and defense. We used RNA-sequencing to query the transcriptomes of jazQ and phyB-9, as well as the combined jazQ phyB-9 sextuple mutatant, and examined how these mutations alter the expression of growth- and defense-associated genes. The data highlight how jasmonate and light signaling pathways contribute to growth and defense, and how their removal genetically promotes additive responses. Overall design: Analysis of Col-0 (wildtype), jazQ, phyB-9, and jazQ phyB-9 (four genotypes), with three biological replicates per genotype - 12 total samples.
• Data files: SRR3212652; SRR3212653; SRR3212654; SRR3212655; SRR3212656; SRR3212657; SRR3212658; SRR3212659; SRR3212660; SRR3212661; SRR3212662; SRR3212663; ERZ1133664; ERZ378389; ERZ512038; ERZ1133648; ERZ378385; ERZ512044; ERZ1133666; ERZ378390; ERZ512039; ERZ1133652; ERZ378387; ERZ512041; ERZ1133662; ERZ378383; ERZ512037; ERZ1133643; ERZ378382; ERZ512043; ERZ1133654; ERZ378386