Study : Arabidopsis thaliana strain:Col-0 Transcriptome or Gene expression

Identification

• Name: Arabidopsis thaliana strain:Col-0 Transcriptome or Gene expression
• Identifier: dXJuOkVWQS9zdHVkeS9QUkpOQTM4ODAwNQ==
• Data link: Link to this study on EBI European Nucleotide Archive
• Description: In a forward genetic screen designed to identify factors important for alternative splicing in Arabidopsis thaliana, we identified mutations in the putative U1 snRNP protein PRP39-1. We performed RNA-seq analysis on two independent loss-of-function alleles and identified a number of endogenous genes that are affected in their alternative splicing (AS) patterns. The most common AS event was intron retention
• Data files: SRR5610320; SRR5610321; SRR5610322; SRR5610323; SRR5610318; SRR5610319; SRR6286808; SRR6286809; ERZ1174596; ERZ526852; ERZ1174592; ERZ526848; ERZ1174597; ERZ526847; ERZ1174594; ERZ526849; ERZ1174601; ERZ526851; ERZ1174598; ERZ526850