Study : Transcriptomes of cucumber wild type line B and lines MSC3, MSC12 and MSC16 carrying mtDNA rearrangements

Identification

• Name: Transcriptomes of cucumber wild type line B and lines MSC3, MSC12 and MSC16 carrying mtDNA rearrangements
• Identifier: dXJuOkVWQS9zdHVkeS9QUkpOQTM4Mjk5NA==
• Data link: Link to this study on EBI European Nucleotide Archive
• Description: Cucumber MSC lines originated from different cell cultures all established from the wild-type inbred line B. MSC lines are characterized by slower growth, chlorotic patterns on the leaves and fruit, lower fertility, and complex rearrangements in their mitochondrial DNAs. RNA-seq was performed on normalized and non-normalized cDNA libraries from MSC3, MSC12, and MSC16 to study their nuclear gene-expression profiles relative to inbred B. Differentially expressed genes were identified.
• Data files: SRR5460683; SRR5460682; SRR5460681; SRR5460680; SRR5460679; SRR5460678; SRR5460677; SRR5460676; SRR5460675; SRR5460674; SRR5460673; SRR5460672; ERZ1115160; ERZ535368; ERZ1115147; ERZ535360; ERZ1115154; ERZ535359; ERZ1115181; ERZ535366; ERZ1115180; ERZ535367; ERZ1115176; ERZ535363; ERZ1115163; ERZ535365; ERZ1115174; ERZ535362; ERZ1115164; ERZ535364; ERZ1115146; ERZ535361