Study : Analysis of eH3.3 occupancy in a ATRX loss-of-function line [ChIP-seq]

Identification

• Name: Analysis of eH3.3 occupancy in a ATRX loss-of-function line [ChIP-seq]
• Identifier: dXJuOkVWQS9zdHVkeS9QUkpOQTM0ODE5Mw==
• Data link: Link to this study on EBI European Nucleotide Archive
• Description: Analysis of H3.3 position and abundance in the presence and absence of a functionnal ATRX protein: we wanted to analyse how the absence of the Arabidopsis putative ATRX chaperone would impact the abundance and the distribution of H3.3 variant at a genome-wide level. Overall design: 2 replicates for WT, 2 replicates for mutant, Input control: in vitro grown 2.5 week-old seedlings were harvested and formaldehyde fixed. ChIP was performed according to Veluchamy et al., 2016 [PMID: 27410265] with Anti-FLAG® M2 Magnetic beads (Sigma)
• Data files: SRR4420303; SRR4420302; SRR4420301; SRR4420300; SRR4420299