Study : RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
Identification
Name
RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
Identifier
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Description
This study evaluates whether different pre-treatments (+Pi, -Pi and +Phi) influences the phosphate starvation transcriptional response triggered by a bacterial synthetic community in Arabidopsis seedlings. Overall design: Arabidopsis seeds (wild-type Col-0 and the mutants phf1 and phr1 phl1) were germinated on Johnson medium containing 0.5 % sucrose with 1 mM Pi (+Pi), 5 µM (-Pi) or 1 mM Phosphite (+Phi). After seven days, plants were transferred to 50 µM Pi (low Pi) or 625 µM Pi (high Pi) media (without sucrose) alone or with the Synthetic Community at 10E5 c.f.u / mL for another 12 days before harvesting. Plants were grown in a growth chamber in a 15-h dark/9-h light regime (21°C day /18°C night). The experiment includes a total of four biological replicates from two independent experiments
Data files
- SRR4295920
- SRR4295925
- SRR4295924
- SRR4295923
- SRR4295922
- SRR4295919
- SRR4295918
- SRR4295917
- SRR4295916
- SRR4295915
- SRR4295914
- SRR4295913
- SRR4295912
- SRR4295911
- SRR4295910
- SRR4295909
- SRR4295908
- SRR4295907
- SRR4295906
- SRR4295905
- ERZ1164146
- ERZ452321
- ERZ521497
- ERZ1164003
- ERZ452253
- ERZ521575
- ERZ1164134
- ERZ452335
- ERZ521523
- ERZ1163972
- ERZ452217
- ERZ521606
- ERZ1164190
- ERZ452291
- ERZ521504
- ERZ1164171
- ERZ452242
- ERZ521494
- ERZ1164018
- ERZ452267
Genotype
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