Study : Oryza sativa cultivar:Oryza sativa japonica Transcriptome or Gene expression

Identification

• Name: Oryza sativa cultivar:Oryza sativa japonica Transcriptome or Gene expression
• Identifier: dXJuOkVWQS9zdHVkeS9QUkpOQTM0MzgzNA==
• Data link: Link to this study on EBI European Nucleotide Archive
• Description: To exploit the advantage of PacBio sequencing’s long reads as possible in full-length transcripts study, we used Hiseq2000 paired-end reads to correct CCSs with different minimum predicated accuracy (MPA) rather than minimum of 2 passes of the inserts and validated the full-length splicing isoforms by verifying the chained splicing junctions with at least 2 uniquely mapped Hiseq2000 reads. Our study provides a valuable alternative approach to efficiently identify and validate full-length splicing isoforms on a massive scale in higher eukaryotes with reference genome.
• Data files: SRR4299112; SRR4323445; SRR4323446; SRR4323447; SRR4323448; SRR4323449; SRR4323450; SRR4323451; SRR4323452; SRR4323453; SRR4323454; SRR4323455; SRR4340935; ERZ1139770