Study : Multiple tissue RNA sequencing of 17 Arabidopsis thaliana MAGIC founder accessions




Identification
Name
Multiple tissue RNA sequencing of 17 Arabidopsis thaliana MAGIC founder accessions
Identifier
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Description
We produced RNA-Seq reads from messenger RNA isolated from seedling, root, and floral bud tissue for 17 MAGIC founder accessions (inbred strains) of Arabidopsis thaliana (see Gan et al. 2011. Nature, 477:419-23 for a description of the MAGIC genetic mapping resource). The resulting RNA-Seq data provide a resource to assess tissue-specific expression across different accessions of A. thaliana. Note that comparable read data for accessions Col-0 and Can-0, which are also founders of the MAGIC lines, has previously been released under GEO series GSE30795 (Gan et al. 2011. Nature, 477:419-23). Overall design: Examination of RNA expression across tissues (seedling, root, floral bud) for 17 Arabidopsis thaliana accessions (Bur-0, Ct-1, Edi-0, Hi-0, Kn-0, Ler-0, Mt-0, No-0, Oy-0, Po-0, Rsch-4, Sf-2, Tsu-0, Wil-2, Ws-0, Wu-0, Zu-0).
Data files
- SRR1046880
- SRR1046876
- SRR1046882
- SRR1046883
- SRR1046875
- SRR1046881
- SRR1046874
- SRR1046886
- SRR1046884
- SRR1046887
- SRR1046885
- SRR1046892
- SRR1046889
- SRR1046891
- SRR1046888
- SRR1046893
- SRR1046890
- SRR1046894
- SRR1046897
- SRR1046896
- ERZ1110282
- ERZ272004
- ERZ306583
- ERZ508502
- ERZ1124709
- ERZ272040
- ERZ306601
- ERZ508488
- ERZ1124728
- ERZ271999
- ERZ306572
- ERZ508495
- ERZ1124707
- ERZ272023
- ERZ306598
- ERZ508487
- ERZ1124692
- ERZ272008
- ERZ306607
- ERZ508472
Genotype
Accession number | Name | Taxon |
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