Study : Identification of microRNAs involved in cold stress response in grapevine.

Identification

• Name: Identification of microRNAs involved in cold stress response in grapevine.
• Identifier: dXJuOkVWQS9zdHVkeS9QUkpOQTI4NDIzOA==
• Data link: Link to this study on EBI European Nucleotide Archive
• Description: Two small RNA libraries were generated from micropropagated ‘Muscat Hamburg’ (Vitis vinifera) plantlets under normal and low temperatures (4 °C). A total of 163 known miRNAs and 299 putative novel miRNAs were detected from two small RNA libraries by Solexa sequencing. Forty-four cold-inducible miRNAs were identified through differentially expressed miRNAs (DEMs) analysis; among which, 13 belonged to upregulated DEMs while 31 belonged downregulated DEMs. This study indicated that a diverse set of miRNAs in V. vinifera are cold-inducible and may play an important role in cold stress response. Overall design: Examination of small RNA populations in grapevine under cold treatment and none cold treatment.
• Data files: SRR2029783; SRR2029784