Study : Root transcriptome of the facultative parasitic plant Phtheirospermum japonicum

Identification

• Name: Root transcriptome of the facultative parasitic plant Phtheirospermum japonicum
• Identifier: dXJuOkVWQS9zdHVkeS9QUkpOQTI3NDc5NQ==
• Data link: Link to this study on EBI European Nucleotide Archive
• Description: 47,984 unigenes with putative coding regions with at least 50 amino acids were selected from whole transcriptome (SAMN03271814) of Phtheirospermum japonicum Microarray slides were hybridized with labeled cRNA from roots of 2-week-old Phtheirospermum japonicum plants growing axenically and treated with haustoria-inducer DMBQ (10 µM) for 0, 0.5, 1, 3, 6, 12, 24 and 48 h Overall design: In this study the expression data from three biological replicates of each time-point are presented. In addition, one single biological replication of a mock-treated sample for each time-point. As a control of the background and uneven hybridization, ten probes for randomly selected fifty unrelated sequences were designed and fixed in different locations of the array
• Data files: SRR9592604; SRR9592605; SRR9592606