Protein : Qrob_P0750340.2 Q. robur
Protein Identifier  ? Qrob_P0750340.2 Organism . Name  Quercus robur
Score  69.1 Score Type  egn
Protein Description  (M=2) PTHR11785:SF267 - CATIONIC AMINO ACID TRANSPORTER 5 (PTHR11785:SF267) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 184  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0003333 amino acid transmembrane transport The directed movement of amino acids, organic acids containing one or more amino substituents across a membrane by means of some agent such as a transporter or pore.
GO:0015171 amino acid transmembrane transporter activity Enables the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group.

16 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_005985 1 183 + 183 Gaps:20 35.88 588 63.03 2e-45 Cationic amino acid transporter 5
blastp_kegg lcl|vvi:100254353 1 183 + 183 Gaps:20 35.82 589 59.72 4e-42 uncharacterized LOC100254353
blastp_kegg lcl|pmum:103325522 1 183 + 183 Gaps:20 35.76 590 58.77 1e-40 cationic amino acid transporter 5-like
blastp_kegg lcl|mdm:103445983 1 183 + 183 Gaps:20 35.76 590 59.72 1e-39 cationic amino acid transporter 5-like
blastp_kegg lcl|pxb:103932404 1 183 + 183 Gaps:21 39.15 590 55.84 7e-39 cationic amino acid transporter 5-like
blastp_kegg lcl|sly:101253855 1 183 + 183 Gaps:20 36.19 583 59.24 2e-38 cationic amino acid transporter 5-like
blastp_kegg lcl|sot:102595081 1 183 + 183 Gaps:20 38.25 583 56.50 7e-38 cationic amino acid transporter 5-like
blastp_kegg lcl|cic:CICLE_v10014698mg 1 183 + 183 Gaps:20 33.90 590 59.50 1e-37 hypothetical protein
blastp_kegg lcl|cit:102608385 1 183 + 183 Gaps:20 33.90 590 59.50 1e-37 cationic amino acid transporter 5-like
blastp_kegg lcl|pop:POPTR_0001s12180g 1 183 + 183 Gaps:53 43.98 482 47.17 4e-37 hypothetical protein
blastp_uniprot_sprot sp|O64759|CAAT5_ARATH 1 183 + 183 Gaps:21 37.08 569 54.03 2e-35 Cationic amino acid transporter 5 OS Arabidopsis thaliana GN CAT5 PE 1 SV 1
blastp_uniprot_sprot sp|Q84MA5|CAAT1_ARATH 1 183 + 183 Gaps:20 35.35 594 43.81 3e-23 Cationic amino acid transporter 1 OS Arabidopsis thaliana GN CAT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SHH0|CAAT8_ARATH 1 183 + 183 Gaps:17 33.05 590 44.62 2e-21 Cationic amino acid transporter 8 vacuolar OS Arabidopsis thaliana GN CAT8 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LZ20|CAAT6_ARATH 65 183 + 119 Gaps:16 23.16 583 36.30 1e-10 Cationic amino acid transporter 6 chloroplastic OS Arabidopsis thaliana GN CAT6 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SQZ0|CAAT7_ARATH 65 183 + 119 Gaps:16 23.12 584 36.30 2e-10 Cationic amino acid transporter 7 chloroplastic OS Arabidopsis thaliana GN CAT7 PE 3 SV 1
rpsblast_cdd gnl|CDD|129984 65 183 + 119 Gaps:41 28.73 557 22.50 6e-13 TIGR00906 2A0303 cationic amino acid transport permease.

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 38 66 29 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 98 114 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 133 183 51 PTHR11785:SF267 none none none
Phobius 87 97 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 145 182 38 PF13906 none C-terminus of AA_permease IPR029485
PANTHER 133 183 51 PTHR11785 none none IPR002293
Phobius 16 37 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 183 183 1 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 93 93 PTHR11785 none none IPR002293
Phobius 115 159 45 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 160 182 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 15 15 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 93 93 PTHR11785:SF267 none none none
Phobius 67 86 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

4 Localization

Analysis Start End Length
TMHMM 160 182 22
TMHMM 68 90 22
TMHMM 13 35 22
TMHMM 103 125 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting