Protein : Qrob_P0720460.2 Q. robur
Protein Identifier  ? Qrob_P0720460.2 Organism . Name  Quercus robur
Score  90.0 Score Type  egn
Protein Description  (M=1) PTHR23112 - G PROTEIN-COUPLED RECEPTOR 157-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 307  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0004888 transmembrane signaling receptor activity Combining with an extracellular or intracellular signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.
GO:0007166 cell surface receptor signaling pathway A series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription.

15 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_021504 1 281 + 281 Gaps:4 89.14 313 88.53 3e-180 G-protein-coupled receptor 1 isoform 1
blastp_kegg lcl|pxb:103929650 1 281 + 281 Gaps:4 87.46 319 86.74 1e-176 G-protein coupled receptor 1-like
blastp_kegg lcl|mdm:103421099 1 281 + 281 Gaps:4 87.46 319 86.74 2e-176 G-protein coupled receptor 1-like
blastp_kegg lcl|mdm:103440998 1 281 + 281 Gaps:4 87.46 319 86.74 2e-176 G-protein coupled receptor 1-like
blastp_kegg lcl|vvi:100250714 3 281 + 279 Gaps:5 87.15 319 86.69 9e-176 G-protein coupled receptor 1-like
blastp_kegg lcl|pper:PRUPE_ppa008880mg 1 290 + 290 Gaps:4 91.14 316 82.99 1e-174 hypothetical protein
blastp_kegg lcl|pmum:103320656 1 281 + 281 Gaps:4 87.46 319 85.30 3e-174 G-protein coupled receptor 1
blastp_kegg lcl|csv:101232020 1 281 + 281 Gaps:5 87.42 318 86.33 6e-173 G-protein coupled receptor 1-like
blastp_kegg lcl|csv:101216480 1 281 + 281 Gaps:5 87.42 318 86.33 6e-173 G-protein coupled receptor 1-like
blastp_kegg lcl|cmo:103493710 1 281 + 281 Gaps:5 87.42 318 85.97 2e-172 G-protein coupled receptor 1
blastp_uniprot_sprot sp|O04714|GCR1_ARATH 2 281 + 280 Gaps:4 85.28 326 83.45 2e-168 G-protein coupled receptor 1 OS Arabidopsis thaliana GN GCR1 PE 1 SV 1
blastp_uniprot_sprot sp|Q54U75|CRLA_DICDI 6 269 + 264 Gaps:21 66.40 369 26.53 2e-14 Cyclic AMP receptor-like protein A OS Dictyostelium discoideum GN crlA PE 2 SV 1
blastp_uniprot_sprot sp|Q54MC6|LRLA_DICDI 12 148 + 137 Gaps:1 45.10 306 28.26 5e-13 Latrophilin receptor-like protein A OS Dictyostelium discoideum GN lrlA PE 3 SV 1
blastp_uniprot_sprot sp|Q54WN6|CRLG_DICDI 20 140 + 121 Gaps:15 26.41 515 30.15 4e-09 Cyclic AMP receptor-like protein G OS Dictyostelium discoideum GN crlG PE 3 SV 1
rpsblast_kog gnl|CDD|39395 5 175 + 171 Gaps:13 28.20 610 21.51 5e-08 KOG4193 KOG4193 KOG4193 G protein-coupled receptors [Signal transduction mechanisms].

36 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 78 99 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 11 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 268 306 39 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 10 278 269 SSF81321 none none none
Phobius 67 77 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSiteProfiles 13 269 257 PS50261 none G-protein coupled receptors family 2 profile 2. IPR017981
Phobius 155 177 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 18 188 171 PF05462 none Slime mold cyclic AMP receptor none
PANTHER 4 279 276 PTHR23112:SF0 none none none
Phobius 37 47 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 178 214 37 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 215 231 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 119 135 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 100 118 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 136 154 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 48 66 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 232 242 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 12 36 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PRINTS 43 58 16 PR02001 none GCR1-cAMP receptor family signature IPR022343
PRINTS 218 236 19 PR02001 none GCR1-cAMP receptor family signature IPR022343
PRINTS 249 268 20 PR02001 none GCR1-cAMP receptor family signature IPR022343
PRINTS 74 92 19 PR02001 none GCR1-cAMP receptor family signature IPR022343
PRINTS 24 42 19 PR02001 none GCR1-cAMP receptor family signature IPR022343
Phobius 243 267 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 4 279 276 PTHR23112 none none none
Gene3D 9 213 205 G3DSA:1.20.1070.10 none none none
PRINTS 91 109 19 PR02000 none Putative plant GPCR, GCR1, signature IPR022340
PRINTS 13 28 16 PR02000 none Putative plant GPCR, GCR1, signature IPR022340
PRINTS 76 89 14 PR02000 none Putative plant GPCR, GCR1, signature IPR022340
PRINTS 169 192 24 PR02000 none Putative plant GPCR, GCR1, signature IPR022340

7 Localization

Analysis Start End Length
TMHMM 215 234 19
TMHMM 44 66 22
TMHMM 116 135 19
TMHMM 244 266 22
TMHMM 15 37 22
TMHMM 81 103 22
TMHMM 155 177 22

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting