Protein : Qrob_P0712180.2 Q. robur
Protein Identifier  ? Qrob_P0712180.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=1) K13863 - solute carrier family 7 (cationic amino acid transporter), member 1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 387  
Kegg Orthology  K13863
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0003333 amino acid transmembrane transport The directed movement of amino acids, organic acids containing one or more amino substituents across a membrane by means of some agent such as a transporter or pore.
GO:0015171 amino acid transmembrane transporter activity Enables the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103342307 8 384 + 377 Gaps:34 53.99 639 82.32 0.0 cationic amino acid transporter 4 vacuolar
blastp_kegg lcl|cam:101496400 3 384 + 382 Gaps:35 54.39 638 79.83 0.0 cationic amino acid transporter 4 vacuolar-like
blastp_kegg lcl|pper:PRUPE_ppa016636mg 24 384 + 361 Gaps:33 52.82 621 83.54 0.0 hypothetical protein
blastp_kegg lcl|csv:101218088 3 384 + 382 Gaps:36 55.00 640 78.12 0.0 cationic amino acid transporter 2 vacuolar-like
blastp_kegg lcl|csv:101225469 3 384 + 382 Gaps:36 55.00 640 78.12 0.0 cationic amino acid transporter 2 vacuolar-like
blastp_kegg lcl|cmo:103486015 3 384 + 382 Gaps:36 55.00 640 78.12 0.0 cationic amino acid transporter 4 vacuolar
blastp_kegg lcl|tcc:TCM_025840 1 384 + 384 Gaps:36 54.37 640 77.87 0.0 Cationic amino acid transporter 2 isoform 1
blastp_kegg lcl|tcc:TCM_025843 17 384 + 368 Gaps:34 51.78 645 79.34 0.0 Cationic amino acid transporter 4 isoform 1
blastp_kegg lcl|rcu:RCOM_1321340 1 384 + 384 Gaps:33 70.20 500 77.21 0.0 cationic amino acid transporter putative
blastp_kegg lcl|pxb:103956261 14 371 + 358 Gaps:34 51.26 636 82.21 0.0 cationic amino acid transporter 4 vacuolar-like
blastp_uniprot_sprot sp|Q9ASS7|CAAT2_ARATH 1 384 + 384 Gaps:39 54.65 635 74.64 5e-175 Cationic amino acid transporter 2 vacuolar OS Arabidopsis thaliana GN CAT2 PE 1 SV 1
blastp_uniprot_sprot sp|Q8W4K3|CAAT4_ARATH 22 384 + 363 Gaps:34 55.17 600 77.04 2e-174 Cationic amino acid transporter 4 vacuolar OS Arabidopsis thaliana GN CAT4 PE 1 SV 1
blastp_uniprot_sprot sp|Q8GYB4|CAAT3_ARATH 24 384 + 361 Gaps:36 54.35 609 72.21 2e-158 Cationic amino acid transporter 3 mitochondrial OS Arabidopsis thaliana GN CAT3 PE 2 SV 1
blastp_uniprot_sprot sp|Q6DCE8|CTR2_XENLA 15 383 + 369 Gaps:65 57.23 622 42.13 4e-68 Low affinity cationic amino acid transporter 2 OS Xenopus laevis GN slc7a2 PE 2 SV 1
blastp_uniprot_sprot sp|Q09143|CTR1_MOUSE 24 383 + 360 Gaps:57 54.50 622 42.18 8e-63 High affinity cationic amino acid transporter 1 OS Mus musculus GN Slc7a1 PE 1 SV 1
blastp_uniprot_sprot sp|Q5PR34|CTR2_DANRE 24 383 + 360 Gaps:60 54.37 640 41.38 4e-62 Low affinity cationic amino acid transporter 2 OS Danio rerio GN slc7a2 PE 2 SV 1
blastp_uniprot_sprot sp|P30823|CTR1_RAT 24 383 + 360 Gaps:59 54.65 624 41.94 4e-62 High affinity cationic amino acid transporter 1 OS Rattus norvegicus GN Slc7a1 PE 2 SV 1
blastp_uniprot_sprot sp|P30825|CTR1_HUMAN 24 383 + 360 Gaps:64 55.01 629 41.33 1e-60 High affinity cationic amino acid transporter 1 OS Homo sapiens GN SLC7A1 PE 1 SV 1
blastp_uniprot_sprot sp|P52569|CTR2_HUMAN 25 383 + 359 Gaps:67 52.58 658 40.75 2e-60 Low affinity cationic amino acid transporter 2 OS Homo sapiens GN SLC7A2 PE 1 SV 2
blastp_uniprot_sprot sp|Q797A7|YFNA_BACSU 24 385 + 362 Gaps:47 70.07 461 41.80 2e-59 Uncharacterized amino acid permease YfnA OS Bacillus subtilis (strain 168) GN yfnA PE 3 SV 1
rpsblast_cdd gnl|CDD|129984 25 384 + 360 Gaps:43 58.71 557 44.65 6e-72 TIGR00906 2A0303 cationic amino acid transport permease.
rpsblast_cdd gnl|CDD|129987 44 384 + 341 Gaps:44 70.16 429 38.21 2e-46 TIGR00909 2A0306 amino acid transporter.
rpsblast_cdd gnl|CDD|30877 43 382 + 340 Gaps:49 64.16 466 35.45 1e-24 COG0531 PotE Amino acid transporters [Amino acid transport and metabolism].
rpsblast_cdd gnl|CDD|205698 48 382 + 335 Gaps:56 68.94 425 26.96 2e-22 pfam13520 AA_permease_2 Amino acid permease.
rpsblast_cdd gnl|CDD|183096 40 354 + 315 Gaps:51 60.67 445 29.63 1e-18 PRK11357 frlA putative fructoselysine transporter Provisional.
rpsblast_cdd gnl|CDD|201154 52 381 + 330 Gaps:72 64.27 473 25.00 5e-16 pfam00324 AA_permease Amino acid permease.
rpsblast_cdd gnl|CDD|31310 42 377 + 336 Gaps:60 63.64 462 25.17 6e-15 COG1113 AnsP Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].
rpsblast_cdd gnl|CDD|162101 40 384 + 345 Gaps:64 60.88 501 25.25 1e-14 TIGR00911 2A0308 L-type amino acid transporter.
rpsblast_cdd gnl|CDD|31175 43 376 + 334 Gaps:66 55.45 541 28.00 5e-12 COG0833 LysP Amino acid transporters [Amino acid transport and metabolism].
rpsblast_cdd gnl|CDD|129983 42 379 + 338 Gaps:54 63.00 473 25.84 2e-10 TIGR00905 2A0302 transporter basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that rather commonly are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.

23 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 158 182 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 228 238 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 202 227 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 261 271 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PIRSF 28 384 357 PIRSF006060 none none IPR002293
Pfam 48 381 334 PF13520 none Amino acid permease IPR002293
Phobius 102 157 56 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 316 340 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 71 81 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 82 101 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 272 295 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 120 120 PTHR11785:SF196 none none none
Phobius 1 47 47 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 154 384 231 PTHR11785:SF196 none none none
Phobius 360 382 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 183 201 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 239 260 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 296 315 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 341 359 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 154 384 231 PTHR11785 none none IPR002293
PANTHER 1 120 120 PTHR11785 none none IPR002293
Phobius 48 70 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 383 386 4 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

8 Localization

Analysis Start End Length
TMHMM 207 229 22
TMHMM 236 258 22
TMHMM 53 75 22
TMHMM 160 182 22
TMHMM 273 295 22
TMHMM 79 101 22
TMHMM 316 338 22
TMHMM 360 382 22

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting