Protein : Qrob_P0666310.2 Q. robur
Protein Identifier  ? Qrob_P0666310.2 Organism . Name  Quercus robur
Score  95.0 Score Type  egn
Protein Description  (M=1) K10609 - cullin 4 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 760  
Kegg Orthology  K10609
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0031625 ubiquitin protein ligase binding Interacting selectively and non-covalently with a ubiquitin protein ligase enzyme, any of the E3 proteins.
GO:0031461 cullin-RING ubiquitin ligase complex Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100233055 19 759 + 741 Gaps:30 85.87 828 94.80 0.0 CUL4 cullin 4
blastp_kegg lcl|tcc:TCM_029474 19 759 + 741 Gaps:30 86.81 819 94.09 0.0 Cullin-4B isoform 1
blastp_kegg lcl|pper:PRUPE_ppa001433mg 19 759 + 741 Gaps:30 85.66 830 93.39 0.0 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_006G165300g 19 759 + 741 Gaps:30 90.34 787 94.09 0.0 hypothetical protein
blastp_kegg lcl|gmx:100805491 19 759 + 741 Gaps:30 90.23 788 94.09 0.0 cullin-4-like
blastp_kegg lcl|cit:102612108 19 759 + 741 Gaps:30 88.43 804 93.67 0.0 cullin-4-like
blastp_kegg lcl|mdm:103435151 19 759 + 741 Gaps:30 85.25 834 92.83 0.0 cullin-4
blastp_kegg lcl|pxb:103951281 19 759 + 741 Gaps:30 85.56 831 92.26 0.0 cullin-4
blastp_kegg lcl|sot:102605478 19 759 + 741 Gaps:30 86.29 824 92.41 0.0 cullin-4-like
blastp_kegg lcl|pmum:103325198 19 759 + 741 Gaps:39 85.51 821 93.30 0.0 cullin-4
blastp_pdb 4a0l_H 21 759 + 739 Gaps:32 97.66 726 59.66 0.0 mol:protein length:726 CULLIN-4B
blastp_pdb 4a0l_E 21 759 + 739 Gaps:32 97.66 726 59.66 0.0 mol:protein length:726 CULLIN-4B
blastp_pdb 4a0c_E 21 759 + 739 Gaps:32 95.68 741 59.66 0.0 mol:protein length:741 CULLIN-4B
blastp_pdb 4a0c_C 21 759 + 739 Gaps:32 95.68 741 59.66 0.0 mol:protein length:741 CULLIN-4B
blastp_pdb 2hye_C 21 759 + 739 Gaps:34 93.41 759 58.67 0.0 mol:protein length:759 Cullin-4A
blastp_pdb 4a0k_A 21 759 + 739 Gaps:34 95.55 742 58.67 0.0 mol:protein length:742 CULLIN-4A
blastp_pdb 1ldj_A 87 759 + 673 Gaps:64 91.18 760 33.04 6e-94 mol:protein length:760 Cullin homolog 1
blastp_pdb 1u6g_A 87 759 + 673 Gaps:64 89.30 776 33.04 1e-93 mol:protein length:776 Cullin homolog 1
blastp_pdb 4a64_D 22 391 + 370 Gaps:20 99.44 354 48.01 3e-92 mol:protein length:354 CULLIN-4B
blastp_pdb 4a64_C 22 391 + 370 Gaps:20 99.44 354 48.01 3e-92 mol:protein length:354 CULLIN-4B
blastp_uniprot_sprot sp|Q8LGH4|CUL4_ARATH 13 759 + 747 Gaps:30 90.53 792 85.36 0.0 Cullin-4 OS Arabidopsis thaliana GN CUL4 PE 1 SV 1
blastp_uniprot_sprot sp|Q13619|CUL4A_HUMAN 21 759 + 739 Gaps:34 93.41 759 58.67 0.0 Cullin-4A OS Homo sapiens GN CUL4A PE 1 SV 3
blastp_uniprot_sprot sp|Q13620|CUL4B_HUMAN 21 759 + 739 Gaps:32 77.66 913 59.66 0.0 Cullin-4B OS Homo sapiens GN CUL4B PE 1 SV 4
blastp_uniprot_sprot sp|A2A432|CUL4B_MOUSE 21 759 + 739 Gaps:32 73.09 970 59.52 0.0 Cullin-4B OS Mus musculus GN Cul4b PE 1 SV 1
blastp_uniprot_sprot sp|Q3TCH7|CUL4A_MOUSE 21 759 + 739 Gaps:32 93.41 759 58.25 0.0 Cullin-4A OS Mus musculus GN Cul4a PE 1 SV 1
blastp_uniprot_sprot sp|Q54CS2|CUL4_DICDI 22 759 + 738 Gaps:71 92.64 802 48.32 0.0 Cullin-4 OS Dictyostelium discoideum GN culD PE 3 SV 1
blastp_uniprot_sprot sp|Q54NZ5|CUL3_DICDI 27 759 + 733 Gaps:85 97.01 769 42.23 6e-177 Cullin-3 OS Dictyostelium discoideum GN culC PE 3 SV 1
blastp_uniprot_sprot sp|Q9ZVH4|CUL3A_ARATH 28 759 + 732 Gaps:51 96.86 732 42.31 3e-172 Cullin-3A OS Arabidopsis thaliana GN CUL3A PE 1 SV 1
blastp_uniprot_sprot sp|Q9C9L0|CUL3B_ARATH 28 759 + 732 Gaps:51 96.86 732 41.89 3e-172 Cullin-3B OS Arabidopsis thaliana GN CUL3B PE 1 SV 1
blastp_uniprot_sprot sp|B5DF89|CUL3_RAT 23 759 + 737 Gaps:88 97.01 768 40.13 3e-161 Cullin-3 OS Rattus norvegicus GN Cul3 PE 1 SV 2

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 688 753 66 SM00884 "UniPathway:UPA00143" Cullin protein neddylation domain IPR019559
Pfam 689 752 64 PF10557 "UniPathway:UPA00143" Cullin protein neddylation domain IPR019559
Gene3D 291 394 104 G3DSA:1.20.1310.10 none none none
Gene3D 30 171 142 G3DSA:1.20.1310.10 none none none
Pfam 33 661 629 PF00888 none Cullin family IPR001373
Gene3D 592 659 68 G3DSA:1.10.10.10 none none IPR011991
Gene3D 176 290 115 G3DSA:1.20.1310.10 none none none
SUPERFAMILY 389 670 282 SSF75632 "UniPathway:UPA00143" none IPR016158
SMART 422 582 161 SM00182 "UniPathway:UPA00143" Cullin IPR016158
PANTHER 19 58 40 PTHR11932 none none none
PANTHER 78 759 682 PTHR11932 none none none
Gene3D 508 591 84 G3DSA:4.10.1030.10 none none none
PANTHER 19 58 40 PTHR11932:SF27 none none none
PANTHER 78 759 682 PTHR11932:SF27 none none none
Gene3D 395 502 108 G3DSA:1.20.1310.10 none none none
ProSitePatterns 732 759 28 PS01256 "UniPathway:UPA00143" Cullin family signature. IPR016157
SUPERFAMILY 671 759 89 SSF46785 none none none
Gene3D 660 759 100 G3DSA:1.10.10.10 none none IPR011991
ProSiteProfiles 392 632 241 PS50069 "UniPathway:UPA00143" Cullin family profile. IPR016158
SUPERFAMILY 27 388 362 SSF74788 none none IPR016159

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting